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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:82963332-83193352

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136 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slfn5 11 82951349 to 82964840 13491 + protein coding gene schlafen 5
Tssr103613 11 82963446 to 82963458 12 + TSS region transcription start site region 103613
Tssr103614 11 82963567 to 82963578 11 + TSS region transcription start site region 103614
Tssr103615 11 82964086 to 82964095 9 + TSS region transcription start site region 103615
Tssr103616 11 82964519 to 82964528 9 + TSS region transcription start site region 103616
Tssr103617 11 82964560 to 82964580 20 + TSS region transcription start site region 103617
Tssr103618 11 82964588 to 82964598 10 + TSS region transcription start site region 103618
Cpgi3407 11 82970899 to 82971179 280 CpG island CpG island 3407
Gm11424 11 82971092 to 82971920 828 + pseudogene predicted gene 11424
1190001M18Rik 11 82974316 to 82975585 1269 - lincRNA gene RIKEN cDNA 1190001M18 gene
Slfn9 11 82978390 to 82991830 13440 - protein coding gene schlafen 9
Tssr109600 11 82979975 to 82979979 4 - TSS region transcription start site region 109600
D11Pas78 11 82982751 to 82983307 556 DNA segment DNA segment, Chr 11, Pasteur Institute 78
Mir7679 11 82985003 to 82985065 62 - miRNA gene microRNA 7679
Tssr109601 11 82991105 to 82991171 66 - TSS region transcription start site region 109601
Tssr109602 11 82991740 to 82991782 42 - TSS region transcription start site region 109602
Tssr109603 11 82991787 to 82991838 51 - TSS region transcription start site region 109603
Slfn8 11 83002158 to 83020810 18652 - protein coding gene schlafen 8
Tssr109604 11 83002220 to 83002236 16 - TSS region transcription start site region 109604
Tssr109605 11 83002553 to 83002564 11 - TSS region transcription start site region 109605
Tssr109606 11 83002576 to 83002593 17 - TSS region transcription start site region 109606
Tssr109607 11 83002642 to 83002686 44 - TSS region transcription start site region 109607
Tssr109608 11 83003056 to 83003076 20 - TSS region transcription start site region 109608
Tssr109609 11 83003096 to 83003109 13 - TSS region transcription start site region 109609
Tssr109610 11 83003528 to 83003548 20 - TSS region transcription start site region 109610
Tssr109611 11 83003626 to 83003639 13 - TSS region transcription start site region 109611
Tssr109612 11 83003659 to 83003676 17 - TSS region transcription start site region 109612
Tssr109613 11 83003726 to 83003737 11 - TSS region transcription start site region 109613
Tssr109614 11 83003749 to 83003760 11 - TSS region transcription start site region 109614
Tssr109615 11 83004389 to 83004402 13 - TSS region transcription start site region 109615
Tssr109616 11 83005148 to 83005173 25 - TSS region transcription start site region 109616
Tssr109617 11 83012135 to 83012147 12 - TSS region transcription start site region 109617
Tssr109618 11 83012211 to 83012289 78 - TSS region transcription start site region 109618
Tssr109619 11 83012415 to 83012426 11 - TSS region transcription start site region 109619
Tssr109620 11 83012448 to 83012465 17 - TSS region transcription start site region 109620
Tssr109621 11 83012467 to 83012479 12 - TSS region transcription start site region 109621
Tssr109622 11 83012921 to 83012930 9 - TSS region transcription start site region 109622
D11Pas14 11 83019922 to 83020603 681 DNA segment DNA segment, Chr 11, Pasteur Institute 14
Tssr109623 11 83020086 to 83020113 27 - TSS region transcription start site region 109623
Tssr109624 11 83020115 to 83020146 31 - TSS region transcription start site region 109624
Tssr109625 11 83020219 to 83020231 12 - TSS region transcription start site region 109625
Tssr109626 11 83020251 to 83020280 29 - TSS region transcription start site region 109626
Tssr109627 11 83020350 to 83020361 11 - TSS region transcription start site region 109627
Tssr109628 11 83020727 to 83020738 11 - TSS region transcription start site region 109628
Tssr109629 11 83020756 to 83020767 11 - TSS region transcription start site region 109629
Tssr109630 11 83020770 to 83020783 13 - TSS region transcription start site region 109630
Tssr109631 11 83020788 to 83020843 55 - TSS region transcription start site region 109631
Gm11425 11 83027500 to 83027997 497 - pseudogene predicted gene 11425
Slfn10-ps 11 83028130 to 83040042 11912 - pseudogene schlafen 10, pseudogene
Gm27598 11 83032632 to 83032694 62 - miRNA gene predicted gene, 27598
Gm48434 11 83036377 to 83036908 531 + pseudogene predicted gene, 48434
Tssr103619 11 83039859 to 83039874 15 + TSS region transcription start site region 103619
Tssr109632 11 83040193 to 83040219 26 - TSS region transcription start site region 109632
Tssr109633 11 83040416 to 83040432 16 - TSS region transcription start site region 109633
Tssr109634 11 83040471 to 83040480 9 - TSS region transcription start site region 109634
Tssr109635 11 83040483 to 83040518 35 - TSS region transcription start site region 109635
Tssr103620 11 83040607 to 83040612 5 + TSS region transcription start site region 103620
Tssr103621 11 83041256 to 83041288 32 + TSS region transcription start site region 103621
Tssr109636 11 83045003 to 83045029 26 - TSS region transcription start site region 109636
Tssr109637 11 83045627 to 83045645 18 - TSS region transcription start site region 109637
Tssr3606 11 83063492 to 83063526 34 + TSS region transcription start site region 3606
Tssr103622 11 83063936 to 83063978 42 + TSS region transcription start site region 103622
Tssr103623 11 83064383 to 83064409 26 + TSS region transcription start site region 103623
Tssr103624 11 83064444 to 83064455 11 + TSS region transcription start site region 103624
Tssr103625 11 83064466 to 83064471 5 + TSS region transcription start site region 103625
Tssr103626 11 83064490 to 83064498 8 + TSS region transcription start site region 103626
Tssr103627 11 83064519 to 83064540 21 + TSS region transcription start site region 103627
Tssr103628 11 83064782 to 83064802 20 + TSS region transcription start site region 103628
Tssr109638 11 83064908 to 83064920 12 - TSS region transcription start site region 109638
Tssr103629 11 83064977 to 83064984 7 + TSS region transcription start site region 103629
Tssr103630 11 83065027 to 83065032 5 + TSS region transcription start site region 103630
Tssr103631 11 83065092 to 83065109 17 + TSS region transcription start site region 103631
Slfn2 11 83065112 to 83070678 5566 + protein coding gene schlafen 2
Tssr103632 11 83065128 to 83065151 23 + TSS region transcription start site region 103632
Tssr103633 11 83065174 to 83065185 11 + TSS region transcription start site region 103633
Tssr103634 11 83065209 to 83065215 6 + TSS region transcription start site region 103634
Tssr103635 11 83065231 to 83065237 6 + TSS region transcription start site region 103635
Tssr103636 11 83065242 to 83065253 11 + TSS region transcription start site region 103636
Tssr103637 11 83065279 to 83065286 7 + TSS region transcription start site region 103637
Tssr103638 11 83065312 to 83065317 5 + TSS region transcription start site region 103638
Tssr103639 11 83065387 to 83065398 11 + TSS region transcription start site region 103639
Gm20234 11 83065741 to 83067345 1604 - antisense lncRNA gene predicted gene, 20234
Tssr103640 11 83066413 to 83066434 21 + TSS region transcription start site region 103640
Tssr103641 11 83066531 to 83066536 5 + TSS region transcription start site region 103641
Tssr109639 11 83066801 to 83066823 22 - TSS region transcription start site region 109639
Tssr109640 11 83067248 to 83067291 43 - TSS region transcription start site region 109640
D11Pas76 11 83068031 to 83068260 229 DNA segment DNA segment, Chr 11, Pasteur Institute 76
Tssr103642 11 83068398 to 83068420 22 + TSS region transcription start site region 103642
Tssr103643 11 83069278 to 83069296 18 + TSS region transcription start site region 103643
Tssr103644 11 83069327 to 83069349 22 + TSS region transcription start site region 103644
Tssr103645 11 83069508 to 83069520 12 + TSS region transcription start site region 103645
Tssr103646 11 83069577 to 83069594 17 + TSS region transcription start site region 103646
Tssr103647 11 83069746 to 83069750 4 + TSS region transcription start site region 103647
Tssr103648 11 83069816 to 83069830 14 + TSS region transcription start site region 103648
Tssr103649 11 83069861 to 83069878 17 + TSS region transcription start site region 103649
Tssr109641 11 83078158 to 83078182 24 - TSS region transcription start site region 109641
Tssr103650 11 83078332 to 83078352 20 + TSS region transcription start site region 103650
Tssr103651 11 83078354 to 83078369 15 + TSS region transcription start site region 103651
Tssr109642 11 83079866 to 83079871 5 - TSS region transcription start site region 109642
Tssr109643 11 83079884 to 83079897 13 - TSS region transcription start site region 109643
Gm48462 11 83094220 to 83098070 3850 + lincRNA gene predicted gene, 48462
Tssr109644 11 83116590 to 83116592 2 - TSS region transcription start site region 109644
Tssr103652 11 83116680 to 83116689 9 + TSS region transcription start site region 103652
Tssr103653 11 83116788 to 83116797 9 + TSS region transcription start site region 103653
Tssr103654 11 83116809 to 83116850 41 + TSS region transcription start site region 103654
Slfn1 11 83116845 to 83122659 5814 + protein coding gene schlafen 1
Tssr103655 11 83116868 to 83116882 14 + TSS region transcription start site region 103655
Tssr103656 11 83116913 to 83116918 5 + TSS region transcription start site region 103656
Tssr103657 11 83116952 to 83116968 16 + TSS region transcription start site region 103657
Tssr103658 11 83116974 to 83116999 25 + TSS region transcription start site region 103658
Tssr103659 11 83117003 to 83117021 18 + TSS region transcription start site region 103659
Tssr103660 11 83118329 to 83118358 29 + TSS region transcription start site region 103660
Tssr103661 11 83121736 to 83121745 9 + TSS region transcription start site region 103661
Tssr109645 11 83122266 to 83122268 2 - TSS region transcription start site region 109645
Tssr103662 11 83122277 to 83122289 12 + TSS region transcription start site region 103662
Gm38922 11 83123161 to 83124499 1338 + lncRNA gene predicted gene, 38922
Gm48467 11 83124820 to 83125180 360 - pseudogene predicted gene, 48467
Tssr109646 11 83126624 to 83126632 8 - TSS region transcription start site region 109646
Gm48468 11 83136724 to 83136817 93 - pseudogene predicted gene, 48468
Gm48469 11 83148412 to 83148505 93 - pseudogene predicted gene, 48469
Gm48477 11 83160079 to 83160172 93 - pseudogene predicted gene, 48477
Gm48490 11 83171749 to 83171842 93 - pseudogene predicted gene, 48490
Tssr3607 11 83175154 to 83175172 18 + TSS region transcription start site region 3607
Slfn4 11 83175186 to 83190216 15030 + protein coding gene schlafen 4
Tssr103663 11 83175189 to 83175204 15 + TSS region transcription start site region 103663
Tssr103664 11 83175245 to 83175256 11 + TSS region transcription start site region 103664
Tssr3608 11 83175263 to 83175278 15 + TSS region transcription start site region 3608
Tssr103665 11 83176048 to 83176056 8 + TSS region transcription start site region 103665
Tssr103666 11 83176254 to 83176266 12 + TSS region transcription start site region 103666
Tssr103667 11 83176674 to 83176679 5 + TSS region transcription start site region 103667
Tssr103668 11 83185376 to 83185410 34 + TSS region transcription start site region 103668
Tssr103669 11 83191296 to 83191316 20 + TSS region transcription start site region 103669
Tssr103670 11 83191326 to 83191339 13 + TSS region transcription start site region 103670
Slfn3 11 83191330 to 83215154 23824 + protein coding gene schlafen 3
Tssr103671 11 83191341 to 83191357 16 + TSS region transcription start site region 103671
Tssr109647 11 83192174 to 83192214 40 - TSS region transcription start site region 109647