Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:82950899-82991179

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slfn5os 11 82942341 to 82960681 18340 - antisense lncRNA gene schlafen 5, opposite strand
Tssr103590 11 82951346 to 82951360 14 + TSS region transcription start site region 103590
Slfn5 11 82951349 to 82964840 13491 + protein coding gene schlafen 5
Tssr103591 11 82951366 to 82951393 27 + TSS region transcription start site region 103591
Tssr103592 11 82951406 to 82951448 42 + TSS region transcription start site region 103592
Cpgi3406 11 82952050 to 82952216 166 CpG island CpG island 3406
Tssr103593 11 82952062 to 82952094 32 + TSS region transcription start site region 103593
Tssr103594 11 82952095 to 82952125 30 + TSS region transcription start site region 103594
Tssr103595 11 82954556 to 82954575 19 + TSS region transcription start site region 103595
Tssr103596 11 82956593 to 82956604 11 + TSS region transcription start site region 103596
Tssr103597 11 82956894 to 82956905 11 + TSS region transcription start site region 103597
Tssr103598 11 82956945 to 82956959 14 + TSS region transcription start site region 103598
Tssr109597 11 82960648 to 82960671 23 - TSS region transcription start site region 109597
Tssr109598 11 82960673 to 82960683 10 - TSS region transcription start site region 109598
Tssr109599 11 82960693 to 82960698 5 - TSS region transcription start site region 109599
Tssr103599 11 82960895 to 82960906 11 + TSS region transcription start site region 103599
Tssr103600 11 82961260 to 82961272 12 + TSS region transcription start site region 103600
Tssr103601 11 82961517 to 82961544 27 + TSS region transcription start site region 103601
Tssr103602 11 82961700 to 82961743 43 + TSS region transcription start site region 103602
Tssr103603 11 82961835 to 82961849 14 + TSS region transcription start site region 103603
Tssr103604 11 82962112 to 82962129 17 + TSS region transcription start site region 103604
Tssr103605 11 82962320 to 82962338 18 + TSS region transcription start site region 103605
Tssr103606 11 82962641 to 82962684 43 + TSS region transcription start site region 103606
Tssr103607 11 82962773 to 82962785 12 + TSS region transcription start site region 103607
Tssr103608 11 82962869 to 82962880 11 + TSS region transcription start site region 103608
Tssr3605 11 82962984 to 82962985 1 + TSS region transcription start site region 3605
Tssr103609 11 82962991 to 82962992 1 + TSS region transcription start site region 103609
Tssr103610 11 82963070 to 82963085 15 + TSS region transcription start site region 103610
Tssr103611 11 82963270 to 82963294 24 + TSS region transcription start site region 103611
Tssr103612 11 82963306 to 82963315 9 + TSS region transcription start site region 103612
Tssr103613 11 82963446 to 82963458 12 + TSS region transcription start site region 103613
Tssr103614 11 82963567 to 82963578 11 + TSS region transcription start site region 103614
Tssr103615 11 82964086 to 82964095 9 + TSS region transcription start site region 103615
Tssr103616 11 82964519 to 82964528 9 + TSS region transcription start site region 103616
Tssr103617 11 82964560 to 82964580 20 + TSS region transcription start site region 103617
Tssr103618 11 82964588 to 82964598 10 + TSS region transcription start site region 103618
Cpgi3407 11 82970899 to 82971179 280 CpG island CpG island 3407
Gm11424 11 82971092 to 82971920 828 + pseudogene predicted gene 11424
1190001M18Rik 11 82974316 to 82975585 1269 - lincRNA gene RIKEN cDNA 1190001M18 gene
Slfn9 11 82978390 to 82991830 13440 - protein coding gene schlafen 9
Tssr109600 11 82979975 to 82979979 4 - TSS region transcription start site region 109600
D11Pas78 11 82982751 to 82983307 556 DNA segment DNA segment, Chr 11, Pasteur Institute 78
Mir7679 11 82985003 to 82985065 62 - miRNA gene microRNA 7679
Tssr109601 11 82991105 to 82991171 66 - TSS region transcription start site region 109601