Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:82867145-82925737

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rffl 11 82803819 to 82871238 67419 - protein coding gene ring finger and FYVE like domain containing protein
Tssr109586 11 82867349 to 82867351 2 - TSS region transcription start site region 109586
Tssr103585 11 82870410 to 82870433 23 + TSS region transcription start site region 103585
Cpgi3400 11 82870566 to 82871594 1028 CpG island CpG island 3400
Tssr109587 11 82871087 to 82871098 11 - TSS region transcription start site region 109587
Tssr109588 11 82871106 to 82871121 15 - TSS region transcription start site region 109588
Tssr109589 11 82871133 to 82871183 50 - TSS region transcription start site region 109589
Rad51d 11 82876434 to 82890614 14180 - protein coding gene RAD51 paralog D
Tssr109590 11 82889986 to 82890001 15 - TSS region transcription start site region 109590
Tssr109591 11 82890021 to 82890032 11 - TSS region transcription start site region 109591
Cpgi3401 11 82890134 to 82890748 614 CpG island CpG island 3401
Tssr109592 11 82890501 to 82890534 33 - TSS region transcription start site region 109592
Tssr109593 11 82890541 to 82890626 85 - TSS region transcription start site region 109593
Tssr103586 11 82892116 to 82892128 12 + TSS region transcription start site region 103586
Tssr3604 11 82892129 to 82892135 6 + TSS region transcription start site region 3604
Fndc8 11 82892145 to 82900737 8592 + protein coding gene fibronectin type III domain containing 8
Nle1 11 82900768 to 82908411 7643 - protein coding gene notchless homolog 1
Cpgi3402 11 82907614 to 82908625 1011 CpG island CpG island 3402
Tssr109594 11 82908230 to 82908249 19 - TSS region transcription start site region 109594
Tssr109595 11 82908360 to 82908400 40 - TSS region transcription start site region 109595
Tssr109596 11 82910783 to 82910803 20 - TSS region transcription start site region 109596
Unc45b 11 82911253 to 82943406 32153 + protein coding gene unc-45 myosin chaperone B
Tssr103587 11 82911279 to 82911294 15 + TSS region transcription start site region 103587
Tssr103588 11 82911309 to 82911331 22 + TSS region transcription start site region 103588
Unc45bos 11 82924903 to 82933382 8479 - lncRNA gene unc-45 myosin chaperone B, opposite strand