Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:82764423-82844428

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3398 11 82763827 to 82764980 1153 CpG island CpG island 3398
Zfp830 11 82764345 to 82765935 1590 + protein coding gene zinc finger protein 830
Tssr109577 11 82764772 to 82764786 14 - TSS region transcription start site region 109577
Gm11423 11 82779601 to 82781042 1441 - antisense lncRNA gene predicted gene 11423
Cpgi3399 11 82780888 to 82781895 1007 CpG island CpG island 3399
Tssr109578 11 82781039 to 82781082 43 - TSS region transcription start site region 109578
Lig3 11 82781109 to 82804274 23165 + protein coding gene ligase III, DNA, ATP-dependent
Tssr103579 11 82781144 to 82781224 80 + TSS region transcription start site region 103579
Tssr103580 11 82781230 to 82781255 25 + TSS region transcription start site region 103580
Tssr103581 11 82783331 to 82783342 11 + TSS region transcription start site region 103581
Tssr103582 11 82785370 to 82785378 8 + TSS region transcription start site region 103582
Rffl 11 82803819 to 82871238 67419 - protein coding gene ring finger and FYVE like domain containing protein
Tssr109579 11 82804423 to 82804428 5 - TSS region transcription start site region 109579
Tssr109580 11 82807539 to 82807542 3 - TSS region transcription start site region 109580
Tssr103583 11 82827760 to 82827766 6 + TSS region transcription start site region 103583
Tssr109581 11 82829024 to 82829042 18 - TSS region transcription start site region 109581
D11Pas73 11 82829080 to 82829190 110 DNA segment DNA segment, Chr 11, Pasteur Institute 73
Tssr103584 11 82829121 to 82829168 47 + TSS region transcription start site region 103584
29.MMHAP71FLB5.seq 11 82831021 to 82831178 157 DNA segment DNA segment, 29.MMHAP71FLB5.seq
D11Pas70 11 82832450 to 82832600 150 DNA segment DNA segment, Chr 11, Pasteur Institute 70