Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:81065013-81722491

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm11417 11 81072403 to 81083358 10955 + antisense lncRNA gene predicted gene 11417
Tssr109554 11 81075752 to 81075753 1 - TSS region transcription start site region 109554
Cpgi3391 11 81151588 to 81154151 2563 CpG island CpG island 3391
Tssr109555 11 81153603 to 81153642 39 - TSS region transcription start site region 109555
Tssr109556 11 81153645 to 81153662 17 - TSS region transcription start site region 109556
Tssr109557 11 81153705 to 81153719 14 - TSS region transcription start site region 109557
Gm42084 11 81243905 to 81252614 8709 - lncRNA gene predicted gene, 42084
D11Mit319 11 81261692 to 81261796 104 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 319
4930527B05Rik 11 81385013 to 81402491 17478 + antisense lncRNA gene RIKEN cDNA 4930527B05 gene
Cpgi3392 11 81572630 to 81573186 556 CpG island CpG island 3392
1700071K01Rik 11 81572655 to 81573473 818 - pseudogene RIKEN cDNA 1700071K01 gene
Cpgi3393 11 81573450 to 81573651 201 CpG island CpG island 3393
Tssr109558 11 81573516 to 81573542 26 - TSS region transcription start site region 109558
Tssr103556 11 81587353 to 81587364 11 + TSS region transcription start site region 103556
Gm11418 11 81587361 to 81593478 6117 + antisense lncRNA gene predicted gene 11418
Tssr109559 11 81593114 to 81593118 4 - TSS region transcription start site region 109559
D11Bhm129 11 81663480 to 81663695 215 DNA segment DNA segment, Chr 11, Boehm 129
D11Bhm30 11 81670807 to 81671002 195 DNA segment DNA segment, Chr 11, Boehm 30
D11Bhm131 11 81674905 to 81675012 107 DNA segment DNA segment, Chr 11, Boehm 131
Tssr3603 11 81675965 to 81675968 3 + TSS region transcription start site region 3603
D11Bhm132 11 81709358 to 81709523 165 DNA segment DNA segment, Chr 11, Boehm 132