Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:80378615-80523248

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3383 11 80383101 to 80383778 677 CpG island CpG island 3383
Tssr109542 11 80383150 to 80383182 32 - TSS region transcription start site region 109542
Zfp207 11 80383279 to 80405733 22454 + protein coding gene zinc finger protein 207
Tssr103516 11 80383299 to 80383304 5 + TSS region transcription start site region 103516
Tssr103517 11 80383309 to 80383336 27 + TSS region transcription start site region 103517
Tssr103518 11 80383398 to 80383415 17 + TSS region transcription start site region 103518
Tssr103519 11 80384042 to 80384048 6 + TSS region transcription start site region 103519
Tssr103520 11 80386518 to 80386525 7 + TSS region transcription start site region 103520
Tssr103521 11 80389074 to 80389092 18 + TSS region transcription start site region 103521
Tssr103522 11 80389416 to 80389419 3 + TSS region transcription start site region 103522
Tssr103523 11 80391828 to 80391851 23 + TSS region transcription start site region 103523
Tssr103524 11 80391929 to 80391948 19 + TSS region transcription start site region 103524
Tssr103525 11 80394275 to 80394413 138 + TSS region transcription start site region 103525
Tssr103526 11 80395535 to 80395548 13 + TSS region transcription start site region 103526
Tssr103527 11 80399628 to 80399634 6 + TSS region transcription start site region 103527
Tssr103528 11 80403345 to 80403349 4 + TSS region transcription start site region 103528
Cpgi3384 11 80428373 to 80429435 1062 CpG island CpG island 3384
Tssr103529 11 80428598 to 80428656 58 + TSS region transcription start site region 103529
Psmd11 11 80428615 to 80473248 44633 + protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
Tssr109543 11 80429305 to 80429313 8 - TSS region transcription start site region 109543
Tssr103530 11 80429732 to 80429743 11 + TSS region transcription start site region 103530
Tssr103531 11 80431466 to 80431476 10 + TSS region transcription start site region 103531
Tssr103532 11 80442698 to 80442703 5 + TSS region transcription start site region 103532
Tssr103533 11 80444901 to 80444905 4 + TSS region transcription start site region 103533
Tssr103534 11 80456955 to 80456981 26 + TSS region transcription start site region 103534
D11Bhm121 11 80465350 to 80465461 111 DNA segment DNA segment, Chr 11, Boehm 121
Tssr103535 11 80465501 to 80465523 22 + TSS region transcription start site region 103535
D230035N22Rik 11 80466238 to 80467905 1667 unclassified gene RIKEN cDNA D230035N22 gene
Tssr103536 11 80467856 to 80467890 34 + TSS region transcription start site region 103536
Tssr103537 11 80470818 to 80470829 11 + TSS region transcription start site region 103537
Tssr103538 11 80472380 to 80472417 37 + TSS region transcription start site region 103538
Tssr103539 11 80472611 to 80472621 10 + TSS region transcription start site region 103539
Tssr103540 11 80472659 to 80472676 17 + TSS region transcription start site region 103540
Tssr103541 11 80472683 to 80472686 3 + TSS region transcription start site region 103541
Cpgi3386 11 80476429 to 80478230 1801 CpG island CpG island 3386
Tssr103542 11 80477015 to 80477085 70 + TSS region transcription start site region 103542
Cdk5r1 11 80477046 to 80481179 4133 + protein coding gene cyclin-dependent kinase 5, regulatory subunit 1 (p35)
Tssr103543 11 80477336 to 80477383 47 + TSS region transcription start site region 103543
Tssr103544 11 80477397 to 80477416 19 + TSS region transcription start site region 103544
Tssr103545 11 80480955 to 80480965 10 + TSS region transcription start site region 103545
Myo1d 11 80482126 to 80780025 297899 - protein coding gene myosin ID
Cpgi3387 11 80484129 to 80484365 236 CpG island CpG island 3387
Tssr103546 11 80495044 to 80495051 7 + TSS region transcription start site region 103546
Tssr3600 11 80495069 to 80495081 12 + TSS region transcription start site region 3600
Tssr3601 11 80504687 to 80504691 4 + TSS region transcription start site region 3601
Tssr109544 11 80505077 to 80505093 16 - TSS region transcription start site region 109544
Tssr103547 11 80505254 to 80505276 22 + TSS region transcription start site region 103547
Tssr103548 11 80505313 to 80505331 18 + TSS region transcription start site region 103548
C030013C21Rik 11 80507410 to 80509106 1696 - sense intronic lncRNA gene RIKEN cDNA C030013C21 gene
D11Bhm122 11 80509021 to 80509124 103 DNA segment DNA segment, Chr 11, Boehm 122
Gm31109 11 80509284 to 80511281 1997 + lncRNA gene predicted gene, 31109
Tssr103549 11 80509314 to 80509331 17 + TSS region transcription start site region 103549
Tssr103550 11 80509797 to 80509798 1 + TSS region transcription start site region 103550