Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:80181658-80371876

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3379 11 80183761 to 80184285 524 CpG island CpG island 3379
Tssr103509 11 80183861 to 80183882 21 + TSS region transcription start site region 103509
Rnf135 11 80183872 to 80199753 15881 + protein coding gene ring finger protein 135
Tssr103510 11 80183886 to 80183905 19 + TSS region transcription start site region 103510
Tssr3599 11 80183907 to 80183918 11 + TSS region transcription start site region 3599
Cpgi3380 11 80208711 to 80209753 1042 CpG island CpG island 3380
Tssr103511 11 80209019 to 80209057 38 + TSS region transcription start site region 103511
Rhot1 11 80209032 to 80267907 58875 + protein coding gene ras homolog family member T1
Tssr103512 11 80209066 to 80209164 98 + TSS region transcription start site region 103512
Tssr103513 11 80209714 to 80209718 4 + TSS region transcription start site region 103513
Tssr103514 11 80209902 to 80209905 3 + TSS region transcription start site region 103514
D11Bhm115 11 80254440 to 80254526 86 DNA segment DNA segment, Chr 11, Boehm 115
D11Bhm114 11 80254476 to 80254566 90 DNA segment DNA segment, Chr 11, Boehm 114
D11Bhm116 11 80255074 to 80255144 70 DNA segment DNA segment, Chr 11, Boehm 116
D11Bhm117 11 80276658 to 80276876 218 DNA segment DNA segment, Chr 11, Boehm 117
D11Bhm118 11 80295340 to 80295565 225 DNA segment DNA segment, Chr 11, Boehm 118
Cpgi3381 11 80300441 to 80302075 1634 CpG island CpG island 3381
Tssr103515 11 80300866 to 80300889 23 + TSS region transcription start site region 103515
Rhbdl3 11 80300912 to 80355955 55043 + protein coding gene rhomboid like 3
5730455P16Rik 11 80360492 to 80378034 17542 - protein coding gene RIKEN cDNA 5730455P16 gene
D11Bhm119 11 80363759 to 80363832 73 DNA segment DNA segment, Chr 11, Boehm 119