Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:80171658-80381876

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adap2 11 80154105 to 80178958 24853 + protein coding gene ArfGAP with dual PH domains 2
Adap2os 11 80158861 to 80177629 18768 - antisense lncRNA gene ArfGAP with dual PH domains 2, opposite strand
Tssr103492 11 80173403 to 80173423 20 + TSS region transcription start site region 103492
Tssr103493 11 80177312 to 80177319 7 + TSS region transcription start site region 103493
Tssr103494 11 80177377 to 80177381 4 + TSS region transcription start site region 103494
Tssr103495 11 80177444 to 80177448 4 + TSS region transcription start site region 103495
Tssr3598 11 80177467 to 80177491 24 + TSS region transcription start site region 3598
Tssr103496 11 80177932 to 80177943 11 + TSS region transcription start site region 103496
Tssr103497 11 80177967 to 80177993 26 + TSS region transcription start site region 103497
Tssr103498 11 80178020 to 80178045 25 + TSS region transcription start site region 103498
Tssr103499 11 80178196 to 80178227 31 + TSS region transcription start site region 103499
Tssr103500 11 80178273 to 80178284 11 + TSS region transcription start site region 103500
Tssr103501 11 80178550 to 80178567 17 + TSS region transcription start site region 103501
Tssr103502 11 80178656 to 80178665 9 + TSS region transcription start site region 103502
Tssr103503 11 80178709 to 80178724 15 + TSS region transcription start site region 103503
Tssr103504 11 80178755 to 80178761 6 + TSS region transcription start site region 103504
Tssr103505 11 80178851 to 80178858 7 + TSS region transcription start site region 103505
Tssr103506 11 80179158 to 80179174 16 + TSS region transcription start site region 103506
Tssr103507 11 80179322 to 80179335 13 + TSS region transcription start site region 103507
Tssr103508 11 80179353 to 80179368 15 + TSS region transcription start site region 103508
D11Bhm113 11 80180987 to 80181073 86 DNA segment DNA segment, Chr 11, Boehm 113
Cpgi3379 11 80183761 to 80184285 524 CpG island CpG island 3379
Tssr103509 11 80183861 to 80183882 21 + TSS region transcription start site region 103509
Rnf135 11 80183872 to 80199753 15881 + protein coding gene ring finger protein 135
Tssr103510 11 80183886 to 80183905 19 + TSS region transcription start site region 103510
Tssr3599 11 80183907 to 80183918 11 + TSS region transcription start site region 3599
Cpgi3380 11 80208711 to 80209753 1042 CpG island CpG island 3380
Tssr103511 11 80209019 to 80209057 38 + TSS region transcription start site region 103511
Rhot1 11 80209032 to 80267907 58875 + protein coding gene ras homolog family member T1
Tssr103512 11 80209066 to 80209164 98 + TSS region transcription start site region 103512
Tssr103513 11 80209714 to 80209718 4 + TSS region transcription start site region 103513
Tssr103514 11 80209902 to 80209905 3 + TSS region transcription start site region 103514
D11Bhm115 11 80254440 to 80254526 86 DNA segment DNA segment, Chr 11, Boehm 115
D11Bhm114 11 80254476 to 80254566 90 DNA segment DNA segment, Chr 11, Boehm 114
D11Bhm116 11 80255074 to 80255144 70 DNA segment DNA segment, Chr 11, Boehm 116
D11Bhm117 11 80276658 to 80276876 218 DNA segment DNA segment, Chr 11, Boehm 117
D11Bhm118 11 80295340 to 80295565 225 DNA segment DNA segment, Chr 11, Boehm 118
Cpgi3381 11 80300441 to 80302075 1634 CpG island CpG island 3381
Tssr103515 11 80300866 to 80300889 23 + TSS region transcription start site region 103515
Rhbdl3 11 80300912 to 80355955 55043 + protein coding gene rhomboid like 3
5730455P16Rik 11 80360492 to 80378034 17542 - protein coding gene RIKEN cDNA 5730455P16 gene
D11Bhm119 11 80363759 to 80363832 73 DNA segment DNA segment, Chr 11, Boehm 119
D11Bhm120 11 80376137 to 80376218 81 DNA segment DNA segment, Chr 11, Boehm 120
Cpgi3382 11 80377576 to 80378126 550 CpG island CpG island 3382
Tssr109541 11 80377975 to 80378025 50 - TSS region transcription start site region 109541