MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:79695817-79846728

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rab11fip4	11	79591212 to 79698023	106811	+	protein coding gene	RAB11 family interacting protein 4 (class II)
Cpgi3370	11	79703806 to 79705094	1288		CpG island	CpG island 3370
B230207N12Rik	11	79703875 to 79704449	574		unclassified gene	RIKEN cDNA B230207N12 gene
Tssr109524	11	79704470 to 79704517	47	-	TSS region	transcription start site region 109524
Gm11205	11	79704570 to 79705014	444	+	lincRNA gene	predicted gene 11205
n-TTcgt3	11	79704650 to 79704721	71	+	tRNA gene	nuclear encoded tRNA threonine 3 (anticodon CGT)
Cpgi3371	11	79710696 to 79712387	1691		CpG island	CpG island 3371
Tssr103466	11	79711288 to 79711311	23	+	TSS region	transcription start site region 103466
Tssr103467	11	79711328 to 79711358	30	+	TSS region	transcription start site region 103467
Tssr103468	11	79711359 to 79711375	16	+	TSS region	transcription start site region 103468
Mir193a	11	79711969 to 79712034	65	+	miRNA gene	microRNA 193a
Tssr103469	11	79715899 to 79715903	4	+	TSS region	transcription start site region 103469
Mir365-2	11	79726400 to 79726511	111	+	miRNA gene	microRNA 365-2
Gm46253	11	79728385 to 79731743	3358	+	lncRNA gene	predicted gene, 46253
D11Bhm187	11	79728989 to 79729052	63		DNA segment	DNA segment, Chr 11, Boehm 187
9130204K15Rik	11	79745817 to 79796728	50911	-	lincRNA gene	RIKEN cDNA 9130204K15 gene
D11Bhm109	11	79753710 to 79753887	177		DNA segment	DNA segment, Chr 11, Boehm 109
D11Mit262	11	79765904 to 79766006	102		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 262