Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:79154639-79524640

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D11Bhm100 11 79183508 to 79183697 189 DNA segment DNA segment, Chr 11, Boehm 100
Gm30413 11 79183525 to 79192358 8833 - lncRNA gene predicted gene, 30413
D11Bhm164 11 79185417 to 79185595 178 DNA segment DNA segment, Chr 11, Boehm 164
D11Bhm101 11 79193367 to 79193452 85 DNA segment DNA segment, Chr 11, Boehm 101
Gm11200 11 79212796 to 79213243 447 + pseudogene predicted gene 11200
Gm30470 11 79224685 to 79248435 23750 + lncRNA gene predicted gene, 30470
D11Bhm102 11 79229837 to 79230141 304 DNA segment DNA segment, Chr 11, Boehm 102
Wsb1 11 79239372 to 79254671 15299 - protein coding gene WD repeat and SOCS box-containing 1
Tssr109468 11 79239897 to 79239914 17 - TSS region transcription start site region 109468
Tssr109469 11 79242491 to 79242501 10 - TSS region transcription start site region 109469
Tssr109470 11 79243314 to 79243345 31 - TSS region transcription start site region 109470
Tssr109471 11 79243381 to 79243430 49 - TSS region transcription start site region 109471
Tssr109472 11 79243456 to 79243468 12 - TSS region transcription start site region 109472
Tssr3595 11 79244453 to 79244467 14 - TSS region transcription start site region 3595
D11Bhm103 11 79245060 to 79245144 84 DNA segment DNA segment, Chr 11, Boehm 103
Tssr109473 11 79250972 to 79250992 20 - TSS region transcription start site region 109473
Cpgi3365 11 79253956 to 79254971 1015 CpG island CpG island 3365
Tssr109474 11 79254663 to 79254685 22 - TSS region transcription start site region 109474
Gm44787 11 79258586 to 79273893 15307 - lincRNA gene predicted gene 44787
D11Mit34 11 79265179 to 79265327 148 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 34
Dautb4 11 79265179 to 79265327 148 QTL dopamine uptake transporter binding 4
D11Mit40 11 79265183 to 79265389 206 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 40
D11Mit32 11 79269241 to 79269401 160 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 32
Tssr109475 11 79273880 to 79273891 11 - TSS region transcription start site region 109475
D11Mit94 11 79274749 to 79274874 125 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 94
Tssr103435 11 79276580 to 79276592 12 + TSS region transcription start site region 103435
Tssr3596 11 79276780 to 79276783 3 + TSS region transcription start site region 3596
Tssr109476 11 79287572 to 79287584 12 - TSS region transcription start site region 109476
D11Bhm186 11 79288429 to 79288539 110 DNA segment DNA segment, Chr 11, Boehm 186
Gm9964 11 79296179 to 79296906 727 - protein coding gene predicted gene 9964
Gm30561 11 79305519 to 79326136 20617 + lncRNA gene predicted gene, 30561
Tssr103436 11 79306656 to 79306676 20 + TSS region transcription start site region 103436
D11Mit366 11 79314561 to 79314674 113 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 366
Tssr103437 11 79329587 to 79329593 6 + TSS region transcription start site region 103437
Cpgi3366 11 79339197 to 79340289 1092 CpG island CpG island 3366
Tssr109477 11 79339294 to 79339299 5 - TSS region transcription start site region 109477
Tssr103438 11 79339582 to 79339635 53 + TSS region transcription start site region 103438
Tssr3597 11 79339639 to 79339640 1 + TSS region transcription start site region 3597
Tssr103439 11 79339641 to 79339693 52 + TSS region transcription start site region 103439
Nf1 11 79339693 to 79581612 241919 + protein coding gene neurofibromin 1
Tssr103440 11 79339849 to 79339913 64 + TSS region transcription start site region 103440
D11Bhm104 11 79359961 to 79360046 85 DNA segment DNA segment, Chr 11, Boehm 104
Gm11198 11 79371257 to 79372230 973 - pseudogene predicted gene 11198
Tssr103441 11 79390339 to 79390362 23 + TSS region transcription start site region 103441
D11Bhm105 11 79403776 to 79403874 98 DNA segment DNA segment, Chr 11, Boehm 105
Tssr103442 11 79412057 to 79412105 48 + TSS region transcription start site region 103442
Tssr103443 11 79412677 to 79412681 4 + TSS region transcription start site region 103443
D11Bhm106 11 79443852 to 79443940 88 DNA segment DNA segment, Chr 11, Boehm 106
Tssr103444 11 79450934 to 79450935 1 + TSS region transcription start site region 103444
Gm11199 11 79451941 to 79452447 506 - pseudogene predicted gene 11199
AU040972 11 79481723 to 79484031 2308 - antisense lncRNA gene expressed sequence AU040972
Tssr109478 11 79482338 to 79482347 9 - TSS region transcription start site region 109478
Tssr109479 11 79482383 to 79482400 17 - TSS region transcription start site region 109479
Tssr109480 11 79483454 to 79483473 19 - TSS region transcription start site region 109480
Tssr109481 11 79483896 to 79483901 5 - TSS region transcription start site region 109481
Tssr109482 11 79484027 to 79484057 30 - TSS region transcription start site region 109482
D11Bhm107 11 79499504 to 79499622 118 DNA segment DNA segment, Chr 11, Boehm 107
Omg 11 79500982 to 79504082 3100 - protein coding gene oligodendrocyte myelin glycoprotein
Tssr109483 11 79503967 to 79503978 11 - TSS region transcription start site region 109483
Tssr109484 11 79503984 to 79504056 72 - TSS region transcription start site region 109484
Tssr109485 11 79504078 to 79504089 11 - TSS region transcription start site region 109485
Tssr103445 11 79504186 to 79504210 24 + TSS region transcription start site region 103445
Tssr103446 11 79507537 to 79507568 31 + TSS region transcription start site region 103446
Tssr103447 11 79512182 to 79512185 3 + TSS region transcription start site region 103447
Evi2 11 79513385 to 79530589 17204 - protein coding gene ecotropic viral integration site 2
D11Bhm167 11 79514572 to 79514731 159 DNA segment DNA segment, Chr 11, Boehm 167
D11Bhm166 11 79514710 to 79514921 211 DNA segment DNA segment, Chr 11, Boehm 166
Evi2b 11 79515056 to 79523762 8706 - protein coding gene ecotropic viral integration site 2b
Tssr109486 11 79515569 to 79515581 12 - TSS region transcription start site region 109486
Tssr109487 11 79515767 to 79515779 12 - TSS region transcription start site region 109487
Tssr109488 11 79515965 to 79515968 3 - TSS region transcription start site region 109488
Tssr109489 11 79516271 to 79516272 1 - TSS region transcription start site region 109489
Tssr109490 11 79516318 to 79516329 11 - TSS region transcription start site region 109490
Tssr109491 11 79516351 to 79516363 12 - TSS region transcription start site region 109491
Tssr109492 11 79516378 to 79516412 34 - TSS region transcription start site region 109492
Tssr109493 11 79516417 to 79516430 13 - TSS region transcription start site region 109493
Tssr109494 11 79516432 to 79516447 15 - TSS region transcription start site region 109494
Tssr109495 11 79516472 to 79516483 11 - TSS region transcription start site region 109495
Tssr109496 11 79516485 to 79516504 19 - TSS region transcription start site region 109496
Tssr109497 11 79516524 to 79516555 31 - TSS region transcription start site region 109497
Tssr109498 11 79516585 to 79516597 12 - TSS region transcription start site region 109498
Tssr109499 11 79516622 to 79516633 11 - TSS region transcription start site region 109499
Tssr109500 11 79516653 to 79516664 11 - TSS region transcription start site region 109500
Tssr109501 11 79516693 to 79516704 11 - TSS region transcription start site region 109501
Tssr109502 11 79516719 to 79516728 9 - TSS region transcription start site region 109502
Tssr109503 11 79516794 to 79516805 11 - TSS region transcription start site region 109503
Tssr109504 11 79518671 to 79518702 31 - TSS region transcription start site region 109504
Tssr109505 11 79518830 to 79518846 16 - TSS region transcription start site region 109505
Tssr109506 11 79519353 to 79519362 9 - TSS region transcription start site region 109506
Tssr103448 11 79520212 to 79520226 14 + TSS region transcription start site region 103448
Tssr109507 11 79523716 to 79523753 37 - TSS region transcription start site region 109507
Tssr109508 11 79523760 to 79523761 1 - TSS region transcription start site region 109508
Tssr109509 11 79524334 to 79524381 47 - TSS region transcription start site region 109509
Lore4 11 107725646 to 79265183 -28460463 QTL loss of righting induced by ethanol 4