Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78947008-79227012

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123 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nos2 11 78920787 to 78960232 39445 + protein coding gene nitric oxide synthase 2, inducible
Tssr103386 11 78947839 to 78947850 11 + TSS region transcription start site region 103386
Tssr103387 11 78948207 to 78948233 26 + TSS region transcription start site region 103387
Tssr103388 11 78948294 to 78948306 12 + TSS region transcription start site region 103388
Tssr103389 11 78948328 to 78948337 9 + TSS region transcription start site region 103389
Tssr103390 11 78948342 to 78948357 15 + TSS region transcription start site region 103390
Tssr103391 11 78949058 to 78949074 16 + TSS region transcription start site region 103391
Tssr103392 11 78949083 to 78949117 34 + TSS region transcription start site region 103392
Tssr103393 11 78949155 to 78949175 20 + TSS region transcription start site region 103393
Tssr103394 11 78949176 to 78949185 9 + TSS region transcription start site region 103394
Tssr109427 11 78949197 to 78949204 7 - TSS region transcription start site region 109427
Tssr103395 11 78949598 to 78949628 30 + TSS region transcription start site region 103395
Tssr103396 11 78949649 to 78949663 14 + TSS region transcription start site region 103396
Tssr103397 11 78949953 to 78949963 10 + TSS region transcription start site region 103397
Tssr103398 11 78949964 to 78949981 17 + TSS region transcription start site region 103398
Tssr103399 11 78949986 to 78950008 22 + TSS region transcription start site region 103399
Tssr103400 11 78950014 to 78950047 33 + TSS region transcription start site region 103400
Tssr103401 11 78950058 to 78950067 9 + TSS region transcription start site region 103401
Tssr103402 11 78950072 to 78950096 24 + TSS region transcription start site region 103402
Tssr109428 11 78950101 to 78950110 9 - TSS region transcription start site region 109428
Tssr109429 11 78950126 to 78950141 15 - TSS region transcription start site region 109429
Tssr103403 11 78951103 to 78951135 32 + TSS region transcription start site region 103403
Tssr103404 11 78951139 to 78951179 40 + TSS region transcription start site region 103404
Tssr109430 11 78951164 to 78951185 21 - TSS region transcription start site region 109430
Tssr3592 11 78951186 to 78951192 6 + TSS region transcription start site region 3592
Tssr103405 11 78951200 to 78951209 9 + TSS region transcription start site region 103405
Tssr103406 11 78951221 to 78951226 5 + TSS region transcription start site region 103406
Cpgi3362 11 78952577 to 78952958 381 CpG island CpG island 3362
Tssr103407 11 78952785 to 78952798 13 + TSS region transcription start site region 103407
Tssr103408 11 78952805 to 78952826 21 + TSS region transcription start site region 103408
Tssr103409 11 78952851 to 78952866 15 + TSS region transcription start site region 103409
Tssr103410 11 78952919 to 78952932 13 + TSS region transcription start site region 103410
Tssr103411 11 78952966 to 78952982 16 + TSS region transcription start site region 103411
Tssr103412 11 78952983 to 78952992 9 + TSS region transcription start site region 103412
Tssr103413 11 78955401 to 78955411 10 + TSS region transcription start site region 103413
Tssr103414 11 78956524 to 78956533 9 + TSS region transcription start site region 103414
Tssr103415 11 78957410 to 78957427 17 + TSS region transcription start site region 103415
Tssr103416 11 78957471 to 78957484 13 + TSS region transcription start site region 103416
Tssr103417 11 78957505 to 78957527 22 + TSS region transcription start site region 103417
Tssr103418 11 78957575 to 78957583 8 + TSS region transcription start site region 103418
Tssr103419 11 78958068 to 78958076 8 + TSS region transcription start site region 103419
Tssr103420 11 78958701 to 78958711 10 + TSS region transcription start site region 103420
Tssr103421 11 78958822 to 78958833 11 + TSS region transcription start site region 103421
Tssr103422 11 78959652 to 78959663 11 + TSS region transcription start site region 103422
Tssr103423 11 78959682 to 78959694 12 + TSS region transcription start site region 103423
Tssr103424 11 78959700 to 78959711 11 + TSS region transcription start site region 103424
Tssr103425 11 78959809 to 78959876 67 + TSS region transcription start site region 103425
Tssr103426 11 78959887 to 78959900 13 + TSS region transcription start site region 103426
Tssr109431 11 78959897 to 78959923 26 - TSS region transcription start site region 109431
Tssr103427 11 78959921 to 78959931 10 + TSS region transcription start site region 103427
Tssr103428 11 78961966 to 78961978 12 + TSS region transcription start site region 103428
Tssr103429 11 78962068 to 78962078 10 + TSS region transcription start site region 103429
Lgals9 11 78962979 to 78984924 21945 - protein coding gene lectin, galactose binding, soluble 9
Tssr109432 11 78963121 to 78963138 17 - TSS region transcription start site region 109432
Tssr109433 11 78963233 to 78963250 17 - TSS region transcription start site region 109433
Tssr109434 11 78963332 to 78963356 24 - TSS region transcription start site region 109434
Tssr109435 11 78963409 to 78963437 28 - TSS region transcription start site region 109435
D11Bhm83 11 78964400 to 78964455 55 DNA segment DNA segment, Chr 11, Boehm 83
Tssr109436 11 78965715 to 78965729 14 - TSS region transcription start site region 109436
Tssr109437 11 78965733 to 78965754 21 - TSS region transcription start site region 109437
Tssr109438 11 78965802 to 78965834 32 - TSS region transcription start site region 109438
Tssr109439 11 78966042 to 78966058 16 - TSS region transcription start site region 109439
Tssr109440 11 78967468 to 78967502 34 - TSS region transcription start site region 109440
D11Bhm84 11 78967845 to 78968009 164 DNA segment DNA segment, Chr 11, Boehm 84
Tssr109441 11 78969358 to 78969377 19 - TSS region transcription start site region 109441
Tssr109442 11 78969389 to 78969401 12 - TSS region transcription start site region 109442
Tssr109443 11 78971379 to 78971391 12 - TSS region transcription start site region 109443
Tssr109444 11 78973016 to 78973040 24 - TSS region transcription start site region 109444
Tssr109445 11 78973048 to 78973075 27 - TSS region transcription start site region 109445
Tssr109446 11 78973080 to 78973093 13 - TSS region transcription start site region 109446
Tssr109447 11 78973096 to 78973119 23 - TSS region transcription start site region 109447
Tssr109448 11 78973134 to 78973144 10 - TSS region transcription start site region 109448
Tssr109449 11 78973167 to 78973186 19 - TSS region transcription start site region 109449
Tssr109450 11 78973431 to 78973435 4 - TSS region transcription start site region 109450
Tssr103430 11 78973754 to 78973766 12 + TSS region transcription start site region 103430
Tssr103431 11 78973780 to 78973791 11 + TSS region transcription start site region 103431
D11Bhm85 11 78975998 to 78976051 53 DNA segment DNA segment, Chr 11, Boehm 85
Tssr109451 11 78977732 to 78977739 7 - TSS region transcription start site region 109451
Tssr109452 11 78984834 to 78984923 89 - TSS region transcription start site region 109452
Tssr109453 11 78984936 to 78984943 7 - TSS region transcription start site region 109453
Tssr109454 11 78984947 to 78984957 10 - TSS region transcription start site region 109454
Tssr109455 11 78984966 to 78984972 6 - TSS region transcription start site region 109455
D11Bhm88 11 79006816 to 79006910 94 DNA segment DNA segment, Chr 11, Boehm 88
Ksr1 11 79013440 to 79146407 132967 - protein coding gene kinase suppressor of ras 1
D11Bhm89 11 79013822 to 79013996 174 DNA segment DNA segment, Chr 11, Boehm 89
Cpgi3363 11 79015912 to 79016369 457 CpG island CpG island 3363
Tssr109456 11 79023505 to 79023525 20 - TSS region transcription start site region 109456
Gm11201 11 79023597 to 79031057 7460 + antisense lncRNA gene predicted gene 11201
D11Bhm90 11 79047192 to 79047434 242 DNA segment DNA segment, Chr 11, Boehm 90
Tssr109457 11 79047483 to 79047496 13 - TSS region transcription start site region 109457
Tssr103432 11 79051331 to 79051347 16 + TSS region transcription start site region 103432
D11Bhm91 11 79054517 to 79054685 168 DNA segment DNA segment, Chr 11, Boehm 91
D11Bhm92 11 79056688 to 79057009 321 DNA segment DNA segment, Chr 11, Boehm 92
Tssr3593 11 79057606 to 79057617 11 - TSS region transcription start site region 3593
Tssr109458 11 79059794 to 79059810 16 - TSS region transcription start site region 109458
Tssr109459 11 79059815 to 79059842 27 - TSS region transcription start site region 109459
Tssr109460 11 79059843 to 79059853 10 - TSS region transcription start site region 109460
Tssr109461 11 79059872 to 79059879 7 - TSS region transcription start site region 109461
D11Bhm93 11 79063733 to 79063987 254 DNA segment DNA segment, Chr 11, Boehm 93
D11Seg44 11 79073968 to 79074076 108 DNA segment DNA segment, Chr 11, Segre 44
Tssr3594 11 79076632 to 79076636 4 - TSS region transcription start site region 3594
Tssr109462 11 79087008 to 79087012 4 - TSS region transcription start site region 109462
Tssr103433 11 79087065 to 79087066 1 + TSS region transcription start site region 103433
Tssr103434 11 79087099 to 79087135 36 + TSS region transcription start site region 103434
D11Mit96 11 79111741 to 79111895 154 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 96
Tssr109463 11 79112641 to 79112648 7 - TSS region transcription start site region 109463
D11Bhm95 11 79113860 to 79114008 148 DNA segment DNA segment, Chr 11, Boehm 95
D11Bhm96 11 79128118 to 79128168 50 DNA segment DNA segment, Chr 11, Boehm 96
D11Bhm97 11 79128216 to 79128313 97 DNA segment DNA segment, Chr 11, Boehm 97
D11Mit91 11 79134586 to 79134752 166 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 91
Tssr109464 11 79140087 to 79140091 4 - TSS region transcription start site region 109464
Cpgi3364 11 79145477 to 79146808 1331 CpG island CpG island 3364
Tssr109465 11 79146390 to 79146395 5 - TSS region transcription start site region 109465
Tssr109466 11 79146413 to 79146422 9 - TSS region transcription start site region 109466
Tssr109467 11 79146463 to 79146482 19 - TSS region transcription start site region 109467
D11Bhm98 11 79147418 to 79147734 316 DNA segment DNA segment, Chr 11, Boehm 98
D11Bhm99 11 79150342 to 79150428 86 DNA segment DNA segment, Chr 11, Boehm 99
D11Bhm100 11 79183508 to 79183697 189 DNA segment DNA segment, Chr 11, Boehm 100
Gm30413 11 79183525 to 79192358 8833 - lncRNA gene predicted gene, 30413
D11Bhm164 11 79185417 to 79185595 178 DNA segment DNA segment, Chr 11, Boehm 164
D11Bhm101 11 79193367 to 79193452 85 DNA segment DNA segment, Chr 11, Boehm 101
Gm11200 11 79212796 to 79213243 447 + pseudogene predicted gene 11200
Gm30470 11 79224685 to 79248435 23750 + lncRNA gene predicted gene, 30470