Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78724776-79134788

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199 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccnq 11 78750506 to 78751729 1223 - protein coding gene cyclin Q
Cpgi3359 11 78751327 to 78752084 757 CpG island CpG island 3359
Tssr109421 11 78751656 to 78751711 55 - TSS region transcription start site region 109421
Gm23840 11 78754426 to 78754522 96 - miRNA gene predicted gene, 23840
D11Bhm159 11 78758149 to 78758291 142 DNA segment DNA segment, Chr 11, Boehm 159
D11Mit117 11 78770210 to 78770319 109 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 117
D11Bhm72 11 78771280 to 78771385 105 DNA segment DNA segment, Chr 11, Boehm 72
Tssr3590 11 78772812 to 78772817 5 + TSS region transcription start site region 3590
D11Bhm73 11 78772893 to 78773103 210 DNA segment DNA segment, Chr 11, Boehm 73
D11Bhm74 11 78778210 to 78778427 217 DNA segment DNA segment, Chr 11, Boehm 74
D11Bhm76 11 78808262 to 78808592 330 DNA segment DNA segment, Chr 11, Boehm 76
D11Bhm77 11 78820263 to 78820542 279 DNA segment DNA segment, Chr 11, Boehm 77
D11Bhm78 11 78823344 to 78823566 222 DNA segment DNA segment, Chr 11, Boehm 78
Gm23219 11 78824387 to 78824473 86 + snRNA gene predicted gene, 23219
D11Bhm79 11 78824488 to 78824578 90 DNA segment DNA segment, Chr 11, Boehm 79
Cpgi3360 11 78826429 to 78827004 575 CpG island CpG island 3360
Tssr103332 11 78826575 to 78826618 43 + TSS region transcription start site region 103332
Lyrm9 11 78826595 to 78843899 17304 + protein coding gene LYR motif containing 9
Tssr103333 11 78830399 to 78830403 4 + TSS region transcription start site region 103333
Gm18950 11 78876539 to 78877167 628 - pseudogene predicted gene, 18950
D11Mit246a 11 78877287 to 78877392 105 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 246a
D11Mit246b 11 78878445 to 78878546 101 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 246b
D11Bhm80 11 78884603 to 78884785 182 DNA segment DNA segment, Chr 11, Boehm 80
D11Bhm81 11 78884935 to 78885098 163 DNA segment DNA segment, Chr 11, Boehm 81
Tssr103334 11 78885423 to 78885428 5 + TSS region transcription start site region 103334
Gm19741 11 78890369 to 78894712 4343 - pseudogene predicted gene, 19741
D11Bhm160 11 78919435 to 78919606 171 DNA segment DNA segment, Chr 11, Boehm 160
D11Mit144 11 78919466 to 78919608 142 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 144
Nos2 11 78920787 to 78960232 39445 + protein coding gene nitric oxide synthase 2, inducible
Tssr103335 11 78920819 to 78920834 15 + TSS region transcription start site region 103335
Tssr103336 11 78922217 to 78922306 89 + TSS region transcription start site region 103336
Tssr103337 11 78922322 to 78922339 17 + TSS region transcription start site region 103337
Tssr103338 11 78924210 to 78924217 7 + TSS region transcription start site region 103338
Cpgi3361 11 78924878 to 78925606 728 CpG island CpG island 3361
Tssr103339 11 78925174 to 78925197 23 + TSS region transcription start site region 103339
Tssr103340 11 78926093 to 78926105 12 + TSS region transcription start site region 103340
Tssr103341 11 78926549 to 78926574 25 + TSS region transcription start site region 103341
Tssr103342 11 78927402 to 78927412 10 + TSS region transcription start site region 103342
Tssr103343 11 78928590 to 78928599 9 + TSS region transcription start site region 103343
Tssr103344 11 78928600 to 78928619 19 + TSS region transcription start site region 103344
Tssr103345 11 78929746 to 78929770 24 + TSS region transcription start site region 103345
Tssr103346 11 78929776 to 78929788 12 + TSS region transcription start site region 103346
Tssr103347 11 78929820 to 78929832 12 + TSS region transcription start site region 103347
Tssr103348 11 78929835 to 78929845 10 + TSS region transcription start site region 103348
Tssr103349 11 78931593 to 78931601 8 + TSS region transcription start site region 103349
Tssr103350 11 78931610 to 78931627 17 + TSS region transcription start site region 103350
Tssr103351 11 78931648 to 78931657 9 + TSS region transcription start site region 103351
Tssr103352 11 78931664 to 78931679 15 + TSS region transcription start site region 103352
D11Bhm163 11 78934575 to 78934674 99 DNA segment DNA segment, Chr 11, Boehm 163
Tssr103353 11 78935350 to 78935357 7 + TSS region transcription start site region 103353
Tssr103354 11 78935362 to 78935366 4 + TSS region transcription start site region 103354
Tssr103355 11 78935394 to 78935419 25 + TSS region transcription start site region 103355
Tssr109422 11 78935403 to 78935432 29 - TSS region transcription start site region 109422
Tssr103356 11 78935422 to 78935433 11 + TSS region transcription start site region 103356
Tssr103357 11 78935464 to 78935476 12 + TSS region transcription start site region 103357
Tssr109423 11 78935466 to 78935477 11 - TSS region transcription start site region 109423
Tssr103358 11 78936399 to 78936423 24 + TSS region transcription start site region 103358
Tssr103359 11 78936429 to 78936464 35 + TSS region transcription start site region 103359
Tssr109424 11 78936432 to 78936472 40 - TSS region transcription start site region 109424
Tssr103360 11 78936491 to 78936499 8 + TSS region transcription start site region 103360
D11Bhm161 11 78937256 to 78937383 127 DNA segment DNA segment, Chr 11, Boehm 161
Tssr103361 11 78937557 to 78937572 15 + TSS region transcription start site region 103361
Tssr103362 11 78937808 to 78937852 44 + TSS region transcription start site region 103362
Tssr103363 11 78937888 to 78937898 10 + TSS region transcription start site region 103363
Tssr103364 11 78938183 to 78938191 8 + TSS region transcription start site region 103364
Tssr103365 11 78940001 to 78940016 15 + TSS region transcription start site region 103365
Tssr103366 11 78940042 to 78940061 19 + TSS region transcription start site region 103366
Tssr103367 11 78940248 to 78940262 14 + TSS region transcription start site region 103367
Tssr103368 11 78940263 to 78940276 13 + TSS region transcription start site region 103368
Tssr103369 11 78940306 to 78940315 9 + TSS region transcription start site region 103369
Tssr103370 11 78940346 to 78940355 9 + TSS region transcription start site region 103370
Tssr3591 11 78940572 to 78940581 9 + TSS region transcription start site region 3591
Tssr103371 11 78940635 to 78940645 10 + TSS region transcription start site region 103371
Tssr103372 11 78940945 to 78940977 32 + TSS region transcription start site region 103372
Tssr103373 11 78944668 to 78944680 12 + TSS region transcription start site region 103373
Tssr103374 11 78944732 to 78944776 44 + TSS region transcription start site region 103374
Tssr103375 11 78944783 to 78944799 16 + TSS region transcription start site region 103375
Tssr103376 11 78944808 to 78944824 16 + TSS region transcription start site region 103376
Tssr103377 11 78945228 to 78945264 36 + TSS region transcription start site region 103377
Tssr109425 11 78945251 to 78945300 49 - TSS region transcription start site region 109425
Tssr103378 11 78945633 to 78945656 23 + TSS region transcription start site region 103378
Tssr103379 11 78945669 to 78945679 10 + TSS region transcription start site region 103379
Tssr103380 11 78945682 to 78945694 12 + TSS region transcription start site region 103380
Tssr103381 11 78945718 to 78945752 34 + TSS region transcription start site region 103381
Tssr103382 11 78945869 to 78945879 10 + TSS region transcription start site region 103382
Tssr103383 11 78945880 to 78945888 8 + TSS region transcription start site region 103383
Tssr103384 11 78945891 to 78945898 7 + TSS region transcription start site region 103384
Tssr109426 11 78945902 to 78945919 17 - TSS region transcription start site region 109426
Tssr103385 11 78945903 to 78945918 15 + TSS region transcription start site region 103385
D11Bhm162 11 78946086 to 78946213 127 DNA segment DNA segment, Chr 11, Boehm 162
Tssr103386 11 78947839 to 78947850 11 + TSS region transcription start site region 103386
Tssr103387 11 78948207 to 78948233 26 + TSS region transcription start site region 103387
Tssr103388 11 78948294 to 78948306 12 + TSS region transcription start site region 103388
Tssr103389 11 78948328 to 78948337 9 + TSS region transcription start site region 103389
Tssr103390 11 78948342 to 78948357 15 + TSS region transcription start site region 103390
Tssr103391 11 78949058 to 78949074 16 + TSS region transcription start site region 103391
Tssr103392 11 78949083 to 78949117 34 + TSS region transcription start site region 103392
Tssr103393 11 78949155 to 78949175 20 + TSS region transcription start site region 103393
Tssr103394 11 78949176 to 78949185 9 + TSS region transcription start site region 103394
Tssr109427 11 78949197 to 78949204 7 - TSS region transcription start site region 109427
Tssr103395 11 78949598 to 78949628 30 + TSS region transcription start site region 103395
Tssr103396 11 78949649 to 78949663 14 + TSS region transcription start site region 103396
Tssr103397 11 78949953 to 78949963 10 + TSS region transcription start site region 103397
Tssr103398 11 78949964 to 78949981 17 + TSS region transcription start site region 103398
Tssr103399 11 78949986 to 78950008 22 + TSS region transcription start site region 103399
Tssr103400 11 78950014 to 78950047 33 + TSS region transcription start site region 103400
Tssr103401 11 78950058 to 78950067 9 + TSS region transcription start site region 103401
Tssr103402 11 78950072 to 78950096 24 + TSS region transcription start site region 103402
Tssr109428 11 78950101 to 78950110 9 - TSS region transcription start site region 109428
Tssr109429 11 78950126 to 78950141 15 - TSS region transcription start site region 109429
Tssr103403 11 78951103 to 78951135 32 + TSS region transcription start site region 103403
Tssr103404 11 78951139 to 78951179 40 + TSS region transcription start site region 103404
Tssr109430 11 78951164 to 78951185 21 - TSS region transcription start site region 109430
Tssr3592 11 78951186 to 78951192 6 + TSS region transcription start site region 3592
Tssr103405 11 78951200 to 78951209 9 + TSS region transcription start site region 103405
Tssr103406 11 78951221 to 78951226 5 + TSS region transcription start site region 103406
Cpgi3362 11 78952577 to 78952958 381 CpG island CpG island 3362
Tssr103407 11 78952785 to 78952798 13 + TSS region transcription start site region 103407
Tssr103408 11 78952805 to 78952826 21 + TSS region transcription start site region 103408
Tssr103409 11 78952851 to 78952866 15 + TSS region transcription start site region 103409
Tssr103410 11 78952919 to 78952932 13 + TSS region transcription start site region 103410
Tssr103411 11 78952966 to 78952982 16 + TSS region transcription start site region 103411
Tssr103412 11 78952983 to 78952992 9 + TSS region transcription start site region 103412
Tssr103413 11 78955401 to 78955411 10 + TSS region transcription start site region 103413
Tssr103414 11 78956524 to 78956533 9 + TSS region transcription start site region 103414
Tssr103415 11 78957410 to 78957427 17 + TSS region transcription start site region 103415
Tssr103416 11 78957471 to 78957484 13 + TSS region transcription start site region 103416
Tssr103417 11 78957505 to 78957527 22 + TSS region transcription start site region 103417
Tssr103418 11 78957575 to 78957583 8 + TSS region transcription start site region 103418
Tssr103419 11 78958068 to 78958076 8 + TSS region transcription start site region 103419
Tssr103420 11 78958701 to 78958711 10 + TSS region transcription start site region 103420
Tssr103421 11 78958822 to 78958833 11 + TSS region transcription start site region 103421
Tssr103422 11 78959652 to 78959663 11 + TSS region transcription start site region 103422
Tssr103423 11 78959682 to 78959694 12 + TSS region transcription start site region 103423
Tssr103424 11 78959700 to 78959711 11 + TSS region transcription start site region 103424
Tssr103425 11 78959809 to 78959876 67 + TSS region transcription start site region 103425
Tssr103426 11 78959887 to 78959900 13 + TSS region transcription start site region 103426
Tssr109431 11 78959897 to 78959923 26 - TSS region transcription start site region 109431
Tssr103427 11 78959921 to 78959931 10 + TSS region transcription start site region 103427
Tssr103428 11 78961966 to 78961978 12 + TSS region transcription start site region 103428
Tssr103429 11 78962068 to 78962078 10 + TSS region transcription start site region 103429
Lgals9 11 78962979 to 78984924 21945 - protein coding gene lectin, galactose binding, soluble 9
Tssr109432 11 78963121 to 78963138 17 - TSS region transcription start site region 109432
Tssr109433 11 78963233 to 78963250 17 - TSS region transcription start site region 109433
Tssr109434 11 78963332 to 78963356 24 - TSS region transcription start site region 109434
Tssr109435 11 78963409 to 78963437 28 - TSS region transcription start site region 109435
D11Bhm83 11 78964400 to 78964455 55 DNA segment DNA segment, Chr 11, Boehm 83
Tssr109436 11 78965715 to 78965729 14 - TSS region transcription start site region 109436
Tssr109437 11 78965733 to 78965754 21 - TSS region transcription start site region 109437
Tssr109438 11 78965802 to 78965834 32 - TSS region transcription start site region 109438
Tssr109439 11 78966042 to 78966058 16 - TSS region transcription start site region 109439
Tssr109440 11 78967468 to 78967502 34 - TSS region transcription start site region 109440
D11Bhm84 11 78967845 to 78968009 164 DNA segment DNA segment, Chr 11, Boehm 84
Tssr109441 11 78969358 to 78969377 19 - TSS region transcription start site region 109441
Tssr109442 11 78969389 to 78969401 12 - TSS region transcription start site region 109442
Tssr109443 11 78971379 to 78971391 12 - TSS region transcription start site region 109443
Tssr109444 11 78973016 to 78973040 24 - TSS region transcription start site region 109444
Tssr109445 11 78973048 to 78973075 27 - TSS region transcription start site region 109445
Tssr109446 11 78973080 to 78973093 13 - TSS region transcription start site region 109446
Tssr109447 11 78973096 to 78973119 23 - TSS region transcription start site region 109447
Tssr109448 11 78973134 to 78973144 10 - TSS region transcription start site region 109448
Tssr109449 11 78973167 to 78973186 19 - TSS region transcription start site region 109449
Tssr109450 11 78973431 to 78973435 4 - TSS region transcription start site region 109450
Tssr103430 11 78973754 to 78973766 12 + TSS region transcription start site region 103430
Tssr103431 11 78973780 to 78973791 11 + TSS region transcription start site region 103431
D11Bhm85 11 78975998 to 78976051 53 DNA segment DNA segment, Chr 11, Boehm 85
Tssr109451 11 78977732 to 78977739 7 - TSS region transcription start site region 109451
Tssr109452 11 78984834 to 78984923 89 - TSS region transcription start site region 109452
Tssr109453 11 78984936 to 78984943 7 - TSS region transcription start site region 109453
Tssr109454 11 78984947 to 78984957 10 - TSS region transcription start site region 109454
Tssr109455 11 78984966 to 78984972 6 - TSS region transcription start site region 109455
D11Bhm88 11 79006816 to 79006910 94 DNA segment DNA segment, Chr 11, Boehm 88
Ksr1 11 79013440 to 79146407 132967 - protein coding gene kinase suppressor of ras 1
D11Bhm89 11 79013822 to 79013996 174 DNA segment DNA segment, Chr 11, Boehm 89
Cpgi3363 11 79015912 to 79016369 457 CpG island CpG island 3363
Tssr109456 11 79023505 to 79023525 20 - TSS region transcription start site region 109456
Gm11201 11 79023597 to 79031057 7460 + antisense lncRNA gene predicted gene 11201
D11Bhm90 11 79047192 to 79047434 242 DNA segment DNA segment, Chr 11, Boehm 90
Tssr109457 11 79047483 to 79047496 13 - TSS region transcription start site region 109457
Tssr103432 11 79051331 to 79051347 16 + TSS region transcription start site region 103432
D11Bhm91 11 79054517 to 79054685 168 DNA segment DNA segment, Chr 11, Boehm 91
D11Bhm92 11 79056688 to 79057009 321 DNA segment DNA segment, Chr 11, Boehm 92
Tssr3593 11 79057606 to 79057617 11 - TSS region transcription start site region 3593
Tssr109458 11 79059794 to 79059810 16 - TSS region transcription start site region 109458
Tssr109459 11 79059815 to 79059842 27 - TSS region transcription start site region 109459
Tssr109460 11 79059843 to 79059853 10 - TSS region transcription start site region 109460
Tssr109461 11 79059872 to 79059879 7 - TSS region transcription start site region 109461
D11Bhm93 11 79063733 to 79063987 254 DNA segment DNA segment, Chr 11, Boehm 93
D11Seg44 11 79073968 to 79074076 108 DNA segment DNA segment, Chr 11, Segre 44
Tssr3594 11 79076632 to 79076636 4 - TSS region transcription start site region 3594
Tssr109462 11 79087008 to 79087012 4 - TSS region transcription start site region 109462
Tssr103433 11 79087065 to 79087066 1 + TSS region transcription start site region 103433
Tssr103434 11 79087099 to 79087135 36 + TSS region transcription start site region 103434
D11Mit96 11 79111741 to 79111895 154 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 96
Tssr109463 11 79112641 to 79112648 7 - TSS region transcription start site region 109463
D11Bhm95 11 79113860 to 79114008 148 DNA segment DNA segment, Chr 11, Boehm 95
D11Bhm96 11 79128118 to 79128168 50 DNA segment DNA segment, Chr 11, Boehm 96
D11Bhm97 11 79128216 to 79128313 97 DNA segment DNA segment, Chr 11, Boehm 97
D11Mit91 11 79134586 to 79134752 166 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 91