Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78415871-78476036

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc13a2 11 78397276 to 78422277 25001 - protein coding gene solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
D11Bhm54 11 78417497 to 78417754 257 DNA segment DNA segment, Chr 11, Boehm 54
D11Seg25 11 78417546 to 78417719 173 DNA segment DNA segment, Chr 11, Segre 25
D11Seg26 11 78419393 to 78419559 166 DNA segment DNA segment, Chr 11, Segre 26
Tssr109398 11 78422223 to 78422240 17 - TSS region transcription start site region 109398
Cpgi3346 11 78436012 to 78436189 177 CpG island CpG island 3346
Tssr109399 11 78437291 to 78437292 1 - TSS region transcription start site region 109399
D11Bhm55 11 78440991 to 78441051 60 DNA segment DNA segment, Chr 11, Boehm 55
Gm11195 11 78444107 to 78444901 794 + lincRNA gene predicted gene 11195
D11Seg29 11 78445871 to 78446036 165 DNA segment DNA segment, Chr 11, Segre 29
D11Bhm56 11 78445880 to 78446083 203 DNA segment DNA segment, Chr 11, Boehm 56
D11Seg28 11 78463835 to 78463965 130 DNA segment DNA segment, Chr 11, Segre 28
Cpgi3347 11 78465515 to 78466211 696 CpG island CpG island 3347
Tssr103297 11 78465583 to 78465596 13 + TSS region transcription start site region 103297
Tssr103298 11 78465667 to 78465689 22 + TSS region transcription start site region 103298
Tssr103299 11 78465697 to 78465735 38 + TSS region transcription start site region 103299
Slc46a1 11 78465701 to 78471945 6244 + protein coding gene solute carrier family 46, member 1
D11Seg30 11 78467723 to 78467871 148 DNA segment DNA segment, Chr 11, Segre 30
D11Bhm154 11 78472269 to 78472390 121 DNA segment DNA segment, Chr 11, Boehm 154
D11Bhm155 11 78472274 to 78472371 97 DNA segment DNA segment, Chr 11, Boehm 155
Sarm1 11 78472330 to 78497754 25424 - protein coding gene sterile alpha and HEAT/Armadillo motif containing 1