Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78361394-78411413

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxn1 11 78357577 to 78386558 28981 - protein coding gene forkhead box N1
D11Seg19 11 78361473 to 78361608 135 DNA segment DNA segment, Chr 11, Segre 19
Gm30367 11 78372883 to 78376582 3699 + lncRNA gene predicted gene, 30367
Tssr109390 11 78379034 to 78379040 6 - TSS region transcription start site region 109390
D11Seg23 11 78384240 to 78384551 311 DNA segment DNA segment, Chr 11, Segre 23
Tssr109391 11 78386394 to 78386413 19 - TSS region transcription start site region 109391
Tssr109392 11 78386569 to 78386598 29 - TSS region transcription start site region 109392
Tssr109393 11 78386693 to 78386709 16 - TSS region transcription start site region 109393
Tssr103294 11 78394478 to 78394489 11 + TSS region transcription start site region 103294
Slc13a2os 11 78394485 to 78405657 11172 + antisense lncRNA gene solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, opposite strand
Tssr103295 11 78394493 to 78394505 12 + TSS region transcription start site region 103295
Slc13a2 11 78397276 to 78422277 25001 - protein coding gene solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
Cpgi3345 11 78397394 to 78397715 321 CpG island CpG island 3345
Tssr109394 11 78400818 to 78400829 11 - TSS region transcription start site region 109394
Tssr3588 11 78401383 to 78401384 1 + TSS region transcription start site region 3588
Tssr109395 11 78404574 to 78404583 9 - TSS region transcription start site region 109395
Tssr109396 11 78404586 to 78404607 21 - TSS region transcription start site region 109396
Tssr109397 11 78404622 to 78404636 14 - TSS region transcription start site region 109397
Tssr103296 11 78404700 to 78404732 32 + TSS region transcription start site region 103296