Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78291529-78332457

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rskr 11 78290841 to 78296805 5964 + protein coding gene ribosomal protein S6 kinase related
Gm3948 11 78292848 to 78293956 1108 - lncRNA gene predicted gene 3948
Tssr103263 11 78297329 to 78297333 4 + TSS region transcription start site region 103263
Tssr109387 11 78298483 to 78298488 5 - TSS region transcription start site region 109387
D11Seg15 11 78299903 to 78300051 148 DNA segment DNA segment, Chr 11, Segre 15
Cpgi3341 11 78301329 to 78301974 645 CpG island CpG island 3341
Tssr109388 11 78301470 to 78301478 8 - TSS region transcription start site region 109388
Tssr109389 11 78301484 to 78301530 46 - TSS region transcription start site region 109389
Spag5 11 78301529 to 78322457 20928 + protein coding gene sperm associated antigen 5
Tssr103264 11 78301579 to 78301606 27 + TSS region transcription start site region 103264
Tssr103265 11 78301610 to 78301634 24 + TSS region transcription start site region 103265
D11Bhm49 11 78302631 to 78302873 242 DNA segment DNA segment, Chr 11, Boehm 49
D11Bhm50 11 78313658 to 78313840 182 DNA segment DNA segment, Chr 11, Boehm 50
Tssr103266 11 78315060 to 78315076 16 + TSS region transcription start site region 103266
D11Seg16 11 78319316 to 78319487 171 DNA segment DNA segment, Chr 11, Segre 16
Tssr103267 11 78322965 to 78322996 31 + TSS region transcription start site region 103267
Tssr103268 11 78323068 to 78323080 12 + TSS region transcription start site region 103268
Aldoc 11 78323073 to 78327781 4708 + protein coding gene aldolase C, fructose-bisphosphate
Tssr103269 11 78323087 to 78323112 25 + TSS region transcription start site region 103269
Tssr103270 11 78323120 to 78323145 25 + TSS region transcription start site region 103270
Tssr103271 11 78323151 to 78323166 15 + TSS region transcription start site region 103271
Tssr103272 11 78324225 to 78324236 11 + TSS region transcription start site region 103272
Tssr103273 11 78324253 to 78324272 19 + TSS region transcription start site region 103273
Tssr103274 11 78324287 to 78324301 14 + TSS region transcription start site region 103274
Tssr103275 11 78324303 to 78324395 92 + TSS region transcription start site region 103275
Tssr103276 11 78324404 to 78324415 11 + TSS region transcription start site region 103276
Tssr103277 11 78324466 to 78324479 13 + TSS region transcription start site region 103277
Tssr103278 11 78324636 to 78324648 12 + TSS region transcription start site region 103278
Tssr103279 11 78324673 to 78324689 16 + TSS region transcription start site region 103279
Tssr103280 11 78324713 to 78324762 49 + TSS region transcription start site region 103280
Tssr103281 11 78324891 to 78324930 39 + TSS region transcription start site region 103281
Tssr103282 11 78325933 to 78325943 10 + TSS region transcription start site region 103282
Tssr103283 11 78326304 to 78326332 28 + TSS region transcription start site region 103283
D11Seg17 11 78326341 to 78326495 154 DNA segment DNA segment, Chr 11, Segre 17
Cpgi3342 11 78328156 to 78329004 848 CpG island CpG island 3342
Pigs 11 78328422 to 78342776 14354 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class S
Tssr103284 11 78328425 to 78328472 47 + TSS region transcription start site region 103284