Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78191749-78260738

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab34 11 78188430 to 78192193 3763 + protein coding gene RAB34, member RAS oncogene family
Tssr103244 11 78193363 to 78193369 6 + TSS region transcription start site region 103244
Tssr103245 11 78193379 to 78193424 45 + TSS region transcription start site region 103245
Proca1 11 78193392 to 78205763 12371 + protein coding gene protein interacting with cyclin A1
Cpgi3337 11 78194456 to 78194999 543 CpG island CpG island 3337
Tssr103246 11 78194542 to 78194563 21 + TSS region transcription start site region 103246
Tssr103247 11 78194696 to 78194707 11 + TSS region transcription start site region 103247
Tssr103248 11 78194743 to 78194756 13 + TSS region transcription start site region 103248
Tssr103249 11 78194766 to 78194794 28 + TSS region transcription start site region 103249
Tssr103250 11 78194806 to 78194821 15 + TSS region transcription start site region 103250
Cpgi3338 11 78195074 to 78195266 192 CpG island CpG island 3338
D11Seg8 11 78200014 to 78200384 370 DNA segment DNA segment, Chr 11, Segre 8
D11Seg9 11 78205045 to 78205173 128 DNA segment DNA segment, Chr 11, Segre 9
Supt6 11 78206749 to 78245738 38989 - protein coding gene suppressor of Ty 6
Tssr109382 11 78232064 to 78232079 15 - TSS region transcription start site region 109382
D11Seg11 11 78232463 to 78232602 139 DNA segment DNA segment, Chr 11, Segre 11
Tssr109383 11 78233581 to 78233599 18 - TSS region transcription start site region 109383
Tssr103251 11 78244517 to 78244549 32 + TSS region transcription start site region 103251
Tssr103252 11 78245093 to 78245115 22 + TSS region transcription start site region 103252
Cpgi3339 11 78245332 to 78246293 961 CpG island CpG island 3339
Tssr103253 11 78245510 to 78245519 9 + TSS region transcription start site region 103253
Tssr109384 11 78245674 to 78245716 42 - TSS region transcription start site region 109384
Tssr103254 11 78245743 to 78245821 78 + TSS region transcription start site region 103254
Sdf2 11 78245746 to 78255496 9750 + protein coding gene stromal cell derived factor 2
Tssr109385 11 78245942 to 78245977 35 - TSS region transcription start site region 109385
Tssr103255 11 78245983 to 78246011 28 + TSS region transcription start site region 103255
Tssr109386 11 78246168 to 78246251 83 - TSS region transcription start site region 109386
D11Seg12 11 78247901 to 78248123 222 DNA segment DNA segment, Chr 11, Segre 12
Gm18686 11 78249949 to 78250560 611 - pseudogene predicted gene, 18686
D11Seg13 11 78256782 to 78256960 178 DNA segment DNA segment, Chr 11, Segre 13