Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78179379-78199402

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tlcd1 11 78176716 to 78180820 4104 + protein coding gene TLC domain containing 1
Cpgi3334 11 78177800 to 78179401 1601 CpG island CpG island 3334
Rpl23a 11 78180935 to 78183584 2649 - protein coding gene ribosomal protein L23A
Snord42a 11 78181302 to 78181346 44 - snoRNA gene small nucleolar RNA, C/D box 42A
Snord4a 11 78181687 to 78181756 69 - snoRNA gene small nucleolar RNA, C/D box 4A
Snord42b 11 78183059 to 78183113 54 - snoRNA gene small nucleolar RNA, C/D box 42B
Cpgi3335 11 78183139 to 78183568 429 CpG island CpG island 3335
Tssr109378 11 78183172 to 78183216 44 - TSS region transcription start site region 109378
Tssr109379 11 78183551 to 78183574 23 - TSS region transcription start site region 109379
Cpgi3336 11 78188236 to 78189667 1431 CpG island CpG island 3336
Tssr103237 11 78188422 to 78188447 25 + TSS region transcription start site region 103237
Rab34 11 78188430 to 78192193 3763 + protein coding gene RAB34, member RAS oncogene family
Tssr103238 11 78188452 to 78188483 31 + TSS region transcription start site region 103238
Tssr103239 11 78188737 to 78188787 50 + TSS region transcription start site region 103239
Tssr103240 11 78188806 to 78188835 29 + TSS region transcription start site region 103240
Tssr103241 11 78189079 to 78189101 22 + TSS region transcription start site region 103241
Tssr103242 11 78189111 to 78189126 15 + TSS region transcription start site region 103242
Tssr109380 11 78189379 to 78189402 23 - TSS region transcription start site region 109380
Tssr103243 11 78189596 to 78189608 12 + TSS region transcription start site region 103243
Tssr109381 11 78190130 to 78190142 12 - TSS region transcription start site region 109381
D11Seg7 11 78190420 to 78190555 135 DNA segment DNA segment, Chr 11, Segre 7
Tssr103244 11 78193363 to 78193369 6 + TSS region transcription start site region 103244
Tssr103245 11 78193379 to 78193424 45 + TSS region transcription start site region 103245
Proca1 11 78193392 to 78205763 12371 + protein coding gene protein interacting with cyclin A1
Cpgi3337 11 78194456 to 78194999 543 CpG island CpG island 3337
Tssr103246 11 78194542 to 78194563 21 + TSS region transcription start site region 103246
Tssr103247 11 78194696 to 78194707 11 + TSS region transcription start site region 103247
Tssr103248 11 78194743 to 78194756 13 + TSS region transcription start site region 103248
Tssr103249 11 78194766 to 78194794 28 + TSS region transcription start site region 103249
Tssr103250 11 78194806 to 78194821 15 + TSS region transcription start site region 103250
Cpgi3338 11 78195074 to 78195266 192 CpG island CpG island 3338