Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78114095-78174316

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam222b 11 78094660 to 78156700 62040 + protein coding gene family with sequence similarity 222, member B
D11Seg2 11 78114174 to 78114354 180 DNA segment DNA segment, Chr 11, Segre 2
Cpgi3330 11 78115203 to 78115865 662 CpG island CpG island 3330
Tssr103227 11 78115565 to 78115601 36 + TSS region transcription start site region 103227
D11Bhm47 11 78120900 to 78121018 118 DNA segment DNA segment, Chr 11, Boehm 47
D11Seg3 11 78134950 to 78135112 162 DNA segment DNA segment, Chr 11, Segre 3
D11Seg4 11 78144095 to 78144316 221 DNA segment DNA segment, Chr 11, Segre 4
Gm12571 11 78149196 to 78149438 242 - pseudogene predicted gene 12571
Tssr3586 11 78149460 to 78149485 25 - TSS region transcription start site region 3586
D11Seg24 11 78152988 to 78153129 141 DNA segment DNA segment, Chr 11, Segre 24
Traf4 11 78158499 to 78165589 7090 - protein coding gene TNF receptor associated factor 4
Tssr109372 11 78160910 to 78160929 19 - TSS region transcription start site region 109372
Cpgi3331 11 78164336 to 78166071 1735 CpG island CpG island 3331
D11Seg5 11 78164384 to 78164581 197 DNA segment DNA segment, Chr 11, Segre 5
Tssr109373 11 78165521 to 78165551 30 - TSS region transcription start site region 109373
Tssr103228 11 78165633 to 78165660 27 + TSS region transcription start site region 103228
Tssr103229 11 78165665 to 78165687 22 + TSS region transcription start site region 103229
Nek8 11 78166106 to 78176675 10569 - protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 8
Tssr109374 11 78166771 to 78166807 36 - TSS region transcription start site region 109374
Cpgi3332 11 78169285 to 78169483 198 CpG island CpG island 3332
D11Seg6 11 78171232 to 78171409 177 DNA segment DNA segment, Chr 11, Segre 6