Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:77977274-78087310

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sez6 11 77930839 to 77979052 48213 + protein coding gene seizure related gene 6
Tssr103206 11 77977749 to 77977757 8 + TSS region transcription start site region 103206
Tssr103207 11 77982159 to 77982162 3 + TSS region transcription start site region 103207
Cpgi3325 11 77982253 to 77984892 2639 CpG island CpG island 3325
Tssr103208 11 77982640 to 77982651 11 + TSS region transcription start site region 103208
Tssr103209 11 77982710 to 77982823 113 + TSS region transcription start site region 103209
Phf12 11 77982754 to 78030539 47785 + protein coding gene PHD finger protein 12
Tssr103210 11 77982825 to 77982842 17 + TSS region transcription start site region 103210
Tssr103211 11 77982877 to 77982898 21 + TSS region transcription start site region 103211
D11Bhm45 11 77983984 to 77984086 102 DNA segment DNA segment, Chr 11, Boehm 45
Tssr103212 11 77985753 to 77985758 5 + TSS region transcription start site region 103212
D11Bhm46 11 78025593 to 78025708 115 DNA segment DNA segment, Chr 11, Boehm 46
Dhrs13os 11 78030012 to 78032665 2653 - antisense lncRNA gene dehydrogenase/reductase (SDR family) member 13, opposite strand
Cpgi3326 11 78031889 to 78033067 1178 CpG island CpG island 3326
Tssr103213 11 78032274 to 78032310 36 + TSS region transcription start site region 103213
Dhrs13 11 78032286 to 78037866 5580 + protein coding gene dehydrogenase/reductase (SDR family) member 13
Tssr103214 11 78032312 to 78032343 31 + TSS region transcription start site region 103214
Tssr103215 11 78032346 to 78032366 20 + TSS region transcription start site region 103215
Cpgi3327 11 78037714 to 78038473 759 CpG island CpG island 3327
Tssr103216 11 78037910 to 78037922 12 + TSS region transcription start site region 103216
Flot2 11 78037931 to 78060434 22503 + protein coding gene flotillin 2
Tssr103217 11 78037935 to 78037955 20 + TSS region transcription start site region 103217
Tssr103218 11 78037959 to 78038042 83 + TSS region transcription start site region 103218
9230118H08Rik 11 78042372 to 78043092 720 unclassified gene RIKEN cDNA 9230118H08 gene
Tssr103219 11 78069954 to 78069982 28 + TSS region transcription start site region 103219
Tssr103220 11 78071913 to 78071916 3 + TSS region transcription start site region 103220
Tssr103221 11 78072642 to 78072658 16 + TSS region transcription start site region 103221
Mir144 11 78073005 to 78073070 65 + miRNA gene microRNA 144
Mirc12 11 78073005 to 78073241 236 complex/cluster/region microRNA cluster 12, including Mir144 through Mir451a
Mir451a 11 78073170 to 78073241 71 + miRNA gene microRNA 451a
Mir451b 11 78073170 to 78073241 71 - miRNA gene microRNA 451b
Tssr103222 11 78073224 to 78073237 13 + TSS region transcription start site region 103222
Eral1 11 78073376 to 78080383 7007 - protein coding gene Era (G-protein)-like 1 (E. coli)
Tssr109369 11 78073745 to 78073754 9 - TSS region transcription start site region 109369
Cpgi3328 11 78079986 to 78080574 588 CpG island CpG island 3328
Tssr109370 11 78080360 to 78080387 27 - TSS region transcription start site region 109370
D11Seg1 11 78087165 to 78087261 96 DNA segment DNA segment, Chr 11, Segre 1