Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:77901613-78041687

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29979 11 77896026 to 77907238 11212 + lncRNA gene predicted gene, 29979
Gm11190 11 77912127 to 77929288 17161 - lincRNA gene predicted gene 11190
Cpgi3323 11 77914671 to 77914942 271 CpG island CpG island 3323
Tssr109367 11 77923370 to 77923387 17 - TSS region transcription start site region 109367
Cpgi3324 11 77930530 to 77932329 1799 CpG island CpG island 3324
Sez6 11 77930839 to 77979052 48213 + protein coding gene seizure related gene 6
Tssr103201 11 77930872 to 77930934 62 + TSS region transcription start site region 103201
D11Bhm43 11 77938210 to 77938457 247 DNA segment DNA segment, Chr 11, Boehm 43
Tssr103202 11 77953431 to 77953442 11 + TSS region transcription start site region 103202
Tssr103203 11 77953467 to 77953479 12 + TSS region transcription start site region 103203
Tssr103204 11 77953508 to 77953523 15 + TSS region transcription start site region 103204
Tssr109368 11 77953690 to 77953704 14 - TSS region transcription start site region 109368
Tssr103205 11 77953853 to 77953863 10 + TSS region transcription start site region 103205
D11Bhm152 11 77961254 to 77961507 253 DNA segment DNA segment, Chr 11, Boehm 152
D11Bhm44 11 77971613 to 77971687 74 DNA segment DNA segment, Chr 11, Boehm 44
D11Bhm153 11 77975813 to 77975984 171 DNA segment DNA segment, Chr 11, Boehm 153
Tssr103206 11 77977749 to 77977757 8 + TSS region transcription start site region 103206
Tssr103207 11 77982159 to 77982162 3 + TSS region transcription start site region 103207
Cpgi3325 11 77982253 to 77984892 2639 CpG island CpG island 3325
Tssr103208 11 77982640 to 77982651 11 + TSS region transcription start site region 103208
Tssr103209 11 77982710 to 77982823 113 + TSS region transcription start site region 103209
Phf12 11 77982754 to 78030539 47785 + protein coding gene PHD finger protein 12
Tssr103210 11 77982825 to 77982842 17 + TSS region transcription start site region 103210
Tssr103211 11 77982877 to 77982898 21 + TSS region transcription start site region 103211
D11Bhm45 11 77983984 to 77984086 102 DNA segment DNA segment, Chr 11, Boehm 45
Tssr103212 11 77985753 to 77985758 5 + TSS region transcription start site region 103212
D11Bhm46 11 78025593 to 78025708 115 DNA segment DNA segment, Chr 11, Boehm 46
Dhrs13os 11 78030012 to 78032665 2653 - antisense lncRNA gene dehydrogenase/reductase (SDR family) member 13, opposite strand
Cpgi3326 11 78031889 to 78033067 1178 CpG island CpG island 3326
Tssr103213 11 78032274 to 78032310 36 + TSS region transcription start site region 103213
Dhrs13 11 78032286 to 78037866 5580 + protein coding gene dehydrogenase/reductase (SDR family) member 13
Tssr103214 11 78032312 to 78032343 31 + TSS region transcription start site region 103214
Tssr103215 11 78032346 to 78032366 20 + TSS region transcription start site region 103215
Cpgi3327 11 78037714 to 78038473 759 CpG island CpG island 3327
Tssr103216 11 78037910 to 78037922 12 + TSS region transcription start site region 103216
Flot2 11 78037931 to 78060434 22503 + protein coding gene flotillin 2
Tssr103217 11 78037935 to 78037955 20 + TSS region transcription start site region 103217
Tssr103218 11 78037959 to 78038042 83 + TSS region transcription start site region 103218