Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:77830614-77943872

36 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Myo18a	11	77763246 to 77865980	102734	+	protein coding gene	myosin XVIIIA
Tssr103190	11	77838005 to 77838009	4	+	TSS region	transcription start site region 103190
Tssr103191	11	77838047 to 77838075	28	+	TSS region	transcription start site region 103191
Tssr103192	11	77838082 to 77838106	24	+	TSS region	transcription start site region 103192
Tssr103193	11	77838119 to 77838126	7	+	TSS region	transcription start site region 103193
Tssr103194	11	77838127 to 77838148	21	+	TSS region	transcription start site region 103194
Gm36875	11	77839685 to 77840771	1086	-	lncRNA gene	predicted gene, 36875
Tssr103195	11	77840254 to 77840264	10	+	TSS region	transcription start site region 103195
Tssr103196	11	77840268 to 77840298	30	+	TSS region	transcription start site region 103196
Tssr103197	11	77850722 to 77850733	11	+	TSS region	transcription start site region 103197
Tssr103198	11	77853606 to 77853654	48	+	TSS region	transcription start site region 103198
Cpgi3321	11	77859322 to 77860091	769		CpG island	CpG island 3321
Cpgi3322	11	77876267 to 77876501	234		CpG island	CpG island 3322
Tssr103199	11	77879579 to 77879595	16	+	TSS region	transcription start site region 103199
Pipox	11	77880614 to 77893872	13258	-	protein coding gene	pipecolic acid oxidase
Tssr109358	11	77880988 to 77881028	40	-	TSS region	transcription start site region 109358
Tssr109359	11	77881187 to 77881193	6	-	TSS region	transcription start site region 109359
Tssr109360	11	77882189 to 77882237	48	-	TSS region	transcription start site region 109360
Gm29932	11	77884262 to 77886813	2551	+	lncRNA gene	predicted gene, 29932
Tssr109361	11	77884545 to 77884564	19	-	TSS region	transcription start site region 109361
Tssr103200	11	77884678 to 77884695	17	+	TSS region	transcription start site region 103200
Tssr109362	11	77893007 to 77893023	16	-	TSS region	transcription start site region 109362
D11Bhm41	11	77893316 to 77893482	166		DNA segment	DNA segment, Chr 11, Boehm 41
Tssr109363	11	77893780 to 77893838	58	-	TSS region	transcription start site region 109363
Tssr109364	11	77893843 to 77893854	11	-	TSS region	transcription start site region 109364
Tssr109365	11	77893855 to 77893856	1	-	TSS region	transcription start site region 109365
Tssr109366	11	77893859 to 77893870	11	-	TSS region	transcription start site region 109366
Gm29979	11	77896026 to 77907238	11212	+	lncRNA gene	predicted gene, 29979
D11Bhm42	11	77897982 to 77898101	119		DNA segment	DNA segment, Chr 11, Boehm 42
Gm11190	11	77912127 to 77929288	17161	-	lincRNA gene	predicted gene 11190
Cpgi3323	11	77914671 to 77914942	271		CpG island	CpG island 3323
Tssr109367	11	77923370 to 77923387	17	-	TSS region	transcription start site region 109367
Cpgi3324	11	77930530 to 77932329	1799		CpG island	CpG island 3324
Sez6	11	77930839 to 77979052	48213	+	protein coding gene	seizure related gene 6
Tssr103201	11	77930872 to 77930934	62	+	TSS region	transcription start site region 103201
D11Bhm43	11	77938210 to 77938457	247		DNA segment	DNA segment, Chr 11, Boehm 43