Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:77755254-77925264

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3318 11 77762773 to 77764207 1434 CpG island CpG island 3318
Myo18a 11 77763246 to 77865980 102734 + protein coding gene myosin XVIIIA
Tssr103179 11 77763269 to 77763339 70 + TSS region transcription start site region 103179
Tssr109356 11 77764047 to 77764060 13 - TSS region transcription start site region 109356
Tssr103180 11 77765588 to 77765643 55 + TSS region transcription start site region 103180
Tssr103181 11 77765652 to 77765665 13 + TSS region transcription start site region 103181
Cpgi3319 11 77766421 to 77766967 546 CpG island CpG island 3319
Tssr103182 11 77770881 to 77770885 4 + TSS region transcription start site region 103182
Gm10277 11 77785453 to 77787747 2294 - protein coding gene predicted gene 10277
Cpgi3320 11 77793170 to 77793585 415 CpG island CpG island 3320
Tssr103183 11 77801154 to 77801166 12 + TSS region transcription start site region 103183
Tssr109357 11 77801215 to 77801250 35 - TSS region transcription start site region 109357
Tssr103184 11 77801291 to 77801321 30 + TSS region transcription start site region 103184
Tssr103185 11 77801325 to 77801355 30 + TSS region transcription start site region 103185
Tssr103186 11 77802370 to 77802397 27 + TSS region transcription start site region 103186
Tssr103187 11 77802406 to 77802422 16 + TSS region transcription start site region 103187
Tssr103188 11 77802424 to 77802435 11 + TSS region transcription start site region 103188
Tssr103189 11 77811214 to 77811227 13 + TSS region transcription start site region 103189
D11Bhm40 11 77826320 to 77826450 130 DNA segment DNA segment, Chr 11, Boehm 40
Tssr103190 11 77838005 to 77838009 4 + TSS region transcription start site region 103190
Tssr103191 11 77838047 to 77838075 28 + TSS region transcription start site region 103191
Tssr103192 11 77838082 to 77838106 24 + TSS region transcription start site region 103192
Tssr103193 11 77838119 to 77838126 7 + TSS region transcription start site region 103193
Tssr103194 11 77838127 to 77838148 21 + TSS region transcription start site region 103194
Gm36875 11 77839685 to 77840771 1086 - lncRNA gene predicted gene, 36875
Tssr103195 11 77840254 to 77840264 10 + TSS region transcription start site region 103195
Tssr103196 11 77840268 to 77840298 30 + TSS region transcription start site region 103196
Tssr103197 11 77850722 to 77850733 11 + TSS region transcription start site region 103197
Tssr103198 11 77853606 to 77853654 48 + TSS region transcription start site region 103198
Cpgi3321 11 77859322 to 77860091 769 CpG island CpG island 3321
Cpgi3322 11 77876267 to 77876501 234 CpG island CpG island 3322
Tssr103199 11 77879579 to 77879595 16 + TSS region transcription start site region 103199
Pipox 11 77880614 to 77893872 13258 - protein coding gene pipecolic acid oxidase
Tssr109358 11 77880988 to 77881028 40 - TSS region transcription start site region 109358
Tssr109359 11 77881187 to 77881193 6 - TSS region transcription start site region 109359
Tssr109360 11 77882189 to 77882237 48 - TSS region transcription start site region 109360
Gm29932 11 77884262 to 77886813 2551 + lncRNA gene predicted gene, 29932
Tssr109361 11 77884545 to 77884564 19 - TSS region transcription start site region 109361
Tssr103200 11 77884678 to 77884695 17 + TSS region transcription start site region 103200
Tssr109362 11 77893007 to 77893023 16 - TSS region transcription start site region 109362
D11Bhm41 11 77893316 to 77893482 166 DNA segment DNA segment, Chr 11, Boehm 41
Tssr109363 11 77893780 to 77893838 58 - TSS region transcription start site region 109363
Tssr109364 11 77893843 to 77893854 11 - TSS region transcription start site region 109364
Tssr109365 11 77893855 to 77893856 1 - TSS region transcription start site region 109365
Tssr109366 11 77893859 to 77893870 11 - TSS region transcription start site region 109366
Gm29979 11 77896026 to 77907238 11212 + lncRNA gene predicted gene, 29979
D11Bhm42 11 77897982 to 77898101 119 DNA segment DNA segment, Chr 11, Boehm 42
Gm11190 11 77912127 to 77929288 17161 - lincRNA gene predicted gene 11190
Cpgi3323 11 77914671 to 77914942 271 CpG island CpG island 3323
Tssr109367 11 77923370 to 77923387 17 - TSS region transcription start site region 109367