Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:77603576-77713707

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Taok1 11 77529162 to 77607815 78653 - protein coding gene TAO kinase 1
Cpgi3316 11 77607008 to 77608246 1238 CpG island CpG island 3316
Tssr109340 11 77607600 to 77607635 35 - TSS region transcription start site region 109340
Tssr109341 11 77607812 to 77607860 48 - TSS region transcription start site region 109341
Tssr103163 11 77607954 to 77607965 11 + TSS region transcription start site region 103163
Gm12732 11 77639854 to 77640033 179 + pseudogene predicted gene 12732
Gm12733 11 77644144 to 77644910 766 - pseudogene predicted gene 12733
Gm23132 11 77658576 to 77658707 131 - snoRNA gene predicted gene, 23132
D11Bhm37 11 77658930 to 77659007 77 DNA segment DNA segment, Chr 11, Boehm 37
D11Bhm149 11 77683047 to 77683243 196 DNA segment DNA segment, Chr 11, Boehm 149
Eae7 11 77683047 to 99486994 21803947 QTL experimental allergic encephalomyelitis susceptibility 7
Ltxs3 11 77683047 to 80855532 3172485 QTL lethal factor toxin susceptibility 3
D11Bhm150 11 77683437 to 77683562 125 DNA segment DNA segment, Chr 11, Boehm 150
Tssr103164 11 77685753 to 77685782 29 + TSS region transcription start site region 103164
Cpgi3317 11 77685772 to 77687944 2172 CpG island CpG island 3317
Nufip2 11 77685835 to 77717966 32131 + protein coding gene nuclear fragile X mental retardation protein interacting protein 2
Tssr109342 11 77685978 to 77686009 31 - TSS region transcription start site region 109342
Tssr103165 11 77686132 to 77686146 14 + TSS region transcription start site region 103165
Tssr103166 11 77686161 to 77686179 18 + TSS region transcription start site region 103166
Tssr103167 11 77686229 to 77686240 11 + TSS region transcription start site region 103167
Tssr103168 11 77687251 to 77687274 23 + TSS region transcription start site region 103168
Tssr103169 11 77693576 to 77693580 4 + TSS region transcription start site region 103169
D11Bhm38 11 77707944 to 77708145 201 DNA segment DNA segment, Chr 11, Boehm 38
Tssr103170 11 77710448 to 77710451 3 + TSS region transcription start site region 103170
Tssr103171 11 77710964 to 77710975 11 + TSS region transcription start site region 103171
Tssr103172 11 77711554 to 77711567 13 + TSS region transcription start site region 103172
Tssr103173 11 77713670 to 77713674 4 + TSS region transcription start site region 103173