Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:77598930-77719007

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Taok1 11 77529162 to 77607815 78653 - protein coding gene TAO kinase 1
Cpgi3316 11 77607008 to 77608246 1238 CpG island CpG island 3316
Tssr109340 11 77607600 to 77607635 35 - TSS region transcription start site region 109340
Tssr109341 11 77607812 to 77607860 48 - TSS region transcription start site region 109341
Tssr103163 11 77607954 to 77607965 11 + TSS region transcription start site region 103163
Gm12732 11 77639854 to 77640033 179 + pseudogene predicted gene 12732
Gm12733 11 77644144 to 77644910 766 - pseudogene predicted gene 12733
Gm23132 11 77658576 to 77658707 131 - snoRNA gene predicted gene, 23132
D11Bhm37 11 77658930 to 77659007 77 DNA segment DNA segment, Chr 11, Boehm 37
Eae7 11 77683047 to 99486994 21803947 QTL experimental allergic encephalomyelitis susceptibility 7
D11Bhm149 11 77683047 to 77683243 196 DNA segment DNA segment, Chr 11, Boehm 149
Ltxs3 11 77683047 to 80855532 3172485 QTL lethal factor toxin susceptibility 3
D11Bhm150 11 77683437 to 77683562 125 DNA segment DNA segment, Chr 11, Boehm 150
Tssr103164 11 77685753 to 77685782 29 + TSS region transcription start site region 103164
Cpgi3317 11 77685772 to 77687944 2172 CpG island CpG island 3317
Nufip2 11 77685835 to 77717966 32131 + protein coding gene nuclear fragile X mental retardation protein interacting protein 2
Tssr109342 11 77685978 to 77686009 31 - TSS region transcription start site region 109342
Tssr103165 11 77686132 to 77686146 14 + TSS region transcription start site region 103165
Tssr103166 11 77686161 to 77686179 18 + TSS region transcription start site region 103166
Tssr103167 11 77686229 to 77686240 11 + TSS region transcription start site region 103167
Tssr103168 11 77687251 to 77687274 23 + TSS region transcription start site region 103168
Tssr103169 11 77693576 to 77693580 4 + TSS region transcription start site region 103169
D11Bhm38 11 77707944 to 77708145 201 DNA segment DNA segment, Chr 11, Boehm 38
Tssr103170 11 77710448 to 77710451 3 + TSS region transcription start site region 103170
Tssr103171 11 77710964 to 77710975 11 + TSS region transcription start site region 103171
Tssr103172 11 77711554 to 77711567 13 + TSS region transcription start site region 103172
Tssr103173 11 77713670 to 77713674 4 + TSS region transcription start site region 103173
Tssr103174 11 77715194 to 77715198 4 + TSS region transcription start site region 103174
Cryba1 11 77718615 to 77725283 6668 - protein coding gene crystallin, beta A1
Tssr109343 11 77718659 to 77718666 7 - TSS region transcription start site region 109343
Tssr103175 11 77718726 to 77718749 23 + TSS region transcription start site region 103175
Tssr109344 11 77718737 to 77718756 19 - TSS region transcription start site region 109344
Tssr109345 11 77718768 to 77718778 10 - TSS region transcription start site region 109345
Tssr109346 11 77718781 to 77718814 33 - TSS region transcription start site region 109346
Tssr103176 11 77718796 to 77718812 16 + TSS region transcription start site region 103176
Tssr109347 11 77718849 to 77718856 7 - TSS region transcription start site region 109347
Tssr109348 11 77718889 to 77718906 17 - TSS region transcription start site region 109348