Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:77442411-77490484

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ssh2	11	77216287 to 77460220	243933	+	protein coding gene	slingshot protein phosphatase 2
Tssr103135	11	77456432 to 77456444	12	+	TSS region	transcription start site region 103135
Cpgi3305	11	77462030 to 77463221	1191		CpG island	CpG island 3305
Tssr103136	11	77462325 to 77462421	96	+	TSS region	transcription start site region 103136
Coro6	11	77462411 to 77470484	8073	+	protein coding gene	coronin 6
Tssr103137	11	77462426 to 77462438	12	+	TSS region	transcription start site region 103137
Tssr103138	11	77462558 to 77462565	7	+	TSS region	transcription start site region 103138
Tssr103139	11	77462567 to 77462596	29	+	TSS region	transcription start site region 103139
Tssr103140	11	77462605 to 77462652	47	+	TSS region	transcription start site region 103140
Cpgi3306	11	77466935 to 77468108	1173		CpG island	CpG island 3306
Cpgi3307	11	77469158 to 77469593	435		CpG island	CpG island 3307
Tssr103141	11	77469850 to 77469864	14	+	TSS region	transcription start site region 103141
Tssr103142	11	77469880 to 77469889	9	+	TSS region	transcription start site region 103142
Tssr103143	11	77469999 to 77470016	17	+	TSS region	transcription start site region 103143
Ankrd13b	11	77470485 to 77489678	19193	-	protein coding gene	ankyrin repeat domain 13b
Cpgi3308	11	77471050 to 77472086	1036		CpG island	CpG island 3308
Cpgi3309	11	77472511 to 77472920	409		CpG island	CpG island 3309
Cpgi3310	11	77488885 to 77490386	1501		CpG island	CpG island 3310
Tssr109328	11	77489647 to 77489654	7	-	TSS region	transcription start site region 109328
Tssr109329	11	77489670 to 77489687	17	-	TSS region	transcription start site region 109329
Tssr109330	11	77489802 to 77489809	7	-	TSS region	transcription start site region 109330
2210008F06Rik	11	77489854 to 77491409	1555	+	lincRNA gene	RIKEN cDNA 2210008F06 gene
Tssr109331	11	77489979 to 77489990	11	-	TSS region	transcription start site region 109331
Tssr109332	11	77490010 to 77490055	45	-	TSS region	transcription start site region 109332