Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:77313276-77491786

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ssh2 11 77216287 to 77460220 243933 + protein coding gene slingshot protein phosphatase 2
Tssr103131 11 77340057 to 77340061 4 + TSS region transcription start site region 103131
Cpgi3304 11 77347993 to 77348743 750 CpG island CpG island 3304
Tssr103132 11 77348259 to 77348269 10 + TSS region transcription start site region 103132
Tssr103133 11 77348272 to 77348292 20 + TSS region transcription start site region 103133
Tssr103134 11 77349268 to 77349279 11 + TSS region transcription start site region 103134
Tssr109327 11 77386301 to 77386315 14 - TSS region transcription start site region 109327
Gm30976 11 77398276 to 77406786 8510 - pseudogene predicted gene, 30976
Tssr103135 11 77456432 to 77456444 12 + TSS region transcription start site region 103135
Cpgi3305 11 77462030 to 77463221 1191 CpG island CpG island 3305
Tssr103136 11 77462325 to 77462421 96 + TSS region transcription start site region 103136
Coro6 11 77462411 to 77470484 8073 + protein coding gene coronin 6
Tssr103137 11 77462426 to 77462438 12 + TSS region transcription start site region 103137
Tssr103138 11 77462558 to 77462565 7 + TSS region transcription start site region 103138
Tssr103139 11 77462567 to 77462596 29 + TSS region transcription start site region 103139
Tssr103140 11 77462605 to 77462652 47 + TSS region transcription start site region 103140
Cpgi3306 11 77466935 to 77468108 1173 CpG island CpG island 3306
Cpgi3307 11 77469158 to 77469593 435 CpG island CpG island 3307
Tssr103141 11 77469850 to 77469864 14 + TSS region transcription start site region 103141
Tssr103142 11 77469880 to 77469889 9 + TSS region transcription start site region 103142
Tssr103143 11 77469999 to 77470016 17 + TSS region transcription start site region 103143
Ankrd13b 11 77470485 to 77489678 19193 - protein coding gene ankyrin repeat domain 13b
Cpgi3308 11 77471050 to 77472086 1036 CpG island CpG island 3308
Cpgi3309 11 77472511 to 77472920 409 CpG island CpG island 3309
Cpgi3310 11 77488885 to 77490386 1501 CpG island CpG island 3310
Tssr109328 11 77489647 to 77489654 7 - TSS region transcription start site region 109328
Tssr109329 11 77489670 to 77489687 17 - TSS region transcription start site region 109329
Tssr109330 11 77489802 to 77489809 7 - TSS region transcription start site region 109330
2210008F06Rik 11 77489854 to 77491409 1555 + lincRNA gene RIKEN cDNA 2210008F06 gene
Tssr109331 11 77489979 to 77489990 11 - TSS region transcription start site region 109331
Tssr109332 11 77490010 to 77490055 45 - TSS region transcription start site region 109332
Cpgi3311 11 77491702 to 77491985 283 CpG island CpG island 3311