Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:76647602-76927617

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46288 11 76626653 to 76659995 33342 + lncRNA gene predicted gene, 46288
Gm36558 11 76661893 to 76662347 454 - lncRNA gene predicted gene, 36558
Cpgi3294 11 76666230 to 76666659 429 CpG island CpG island 3294
Cpgi3295 11 76672267 to 76673524 1257 CpG island CpG island 3295
Tssr103098 11 76672456 to 76672461 5 + TSS region transcription start site region 103098
Bhlha9 11 76672470 to 76673676 1206 + protein coding gene basic helix-loop-helix family, member a9
Tssr103099 11 76679642 to 76679647 5 + TSS region transcription start site region 103099
Tssr103100 11 76679757 to 76679787 30 + TSS region transcription start site region 103100
Tssr103101 11 76679831 to 76679840 9 + TSS region transcription start site region 103101
Trarg1 11 76679873 to 76698664 18791 + protein coding gene trafficking regulator of GLUT4 (SLC2A4) 1
Tssr103102 11 76679900 to 76679903 3 + TSS region transcription start site region 103102
Tssr103103 11 76679905 to 76679922 17 + TSS region transcription start site region 103103
Tssr103104 11 76679961 to 76679990 29 + TSS region transcription start site region 103104
Tssr103105 11 76697501 to 76697505 4 + TSS region transcription start site region 103105
Cpgi3296 11 76700103 to 76700600 497 CpG island CpG island 3296
Gosr1 11 76726602 to 76763579 36977 - protein coding gene golgi SNAP receptor complex member 1
Tssr109307 11 76726907 to 76726912 5 - TSS region transcription start site region 109307
Tssr109308 11 76734726 to 76734752 26 - TSS region transcription start site region 109308
Cpgi3297 11 76763486 to 76763692 206 CpG island CpG island 3297
Tssr109309 11 76763550 to 76763582 32 - TSS region transcription start site region 109309
Cpd 11 76778424 to 76847018 68594 - protein coding gene carboxypeptidase D
Tssr109310 11 76778988 to 76779008 20 - TSS region transcription start site region 109310
Tssr109311 11 76779224 to 76779243 19 - TSS region transcription start site region 109311
Tssr109312 11 76787602 to 76787617 15 - TSS region transcription start site region 109312
Tssr109313 11 76809040 to 76809044 4 - TSS region transcription start site region 109313
Tssr109314 11 76812442 to 76812454 12 - TSS region transcription start site region 109314
Tssr109315 11 76844317 to 76844320 3 - TSS region transcription start site region 109315
Tssr103106 11 76845857 to 76845861 4 + TSS region transcription start site region 103106
Cpgi3298 11 76846032 to 76847219 1187 CpG island CpG island 3298
Tssr103107 11 76846512 to 76846528 16 + TSS region transcription start site region 103107
Tssr109316 11 76846968 to 76847045 77 - TSS region transcription start site region 109316
Tssr109317 11 76847047 to 76847052 5 - TSS region transcription start site region 109317
Gm40200 11 76857490 to 76868897 11407 + lncRNA gene predicted gene, 40200
Tssr103108 11 76891109 to 76891130 21 + TSS region transcription start site region 103108
Tssr103109 11 76891132 to 76891152 20 + TSS region transcription start site region 103109
Tssr103110 11 76891192 to 76891203 11 + TSS region transcription start site region 103110
D11Mit372 11 76891763 to 76891900 137 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology-372
D11Mit299 11 76895615 to 76895739 124 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 299
Tssr3580 11 76902020 to 76902037 17 + TSS region transcription start site region 3580
Tssr103111 11 76902152 to 76902167 15 + TSS region transcription start site region 103111
Tmigd1 11 76902159 to 76916587 14428 + protein coding gene transmembrane and immunoglobulin domain containing 1
Tssr103112 11 76902174 to 76902180 6 + TSS region transcription start site region 103112
Tssr103113 11 76902182 to 76902185 3 + TSS region transcription start site region 103113
Tssr3581 11 76904466 to 76904469 3 + TSS region transcription start site region 3581
Tssr103114 11 76904484 to 76904503 19 + TSS region transcription start site region 103114
Tssr103115 11 76904513 to 76904569 56 + TSS region transcription start site region 103115
D11Mit244 11 76909874 to 76909963 89 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 244
Tssr103116 11 76916870 to 76916874 4 + TSS region transcription start site region 103116