Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:76504467-76732204

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abr 11 76416732 to 76577739 161007 - protein coding gene active BCR-related gene
Tssr109278 11 76509208 to 76509228 20 - TSS region transcription start site region 109278
Tssr109279 11 76509231 to 76509240 9 - TSS region transcription start site region 109279
Tssr109280 11 76509257 to 76509307 50 - TSS region transcription start site region 109280
Tssr109281 11 76509338 to 76509352 14 - TSS region transcription start site region 109281
Tssr109282 11 76509421 to 76509435 14 - TSS region transcription start site region 109282
Gm12341 11 76514069 to 76514571 502 + pseudogene predicted gene 12341
Tssr109283 11 76528114 to 76528119 5 - TSS region transcription start site region 109283
Tssr109284 11 76541876 to 76541913 37 - TSS region transcription start site region 109284
Tssr103095 11 76547949 to 76547997 48 + TSS region transcription start site region 103095
Tssr109285 11 76548435 to 76548439 4 - TSS region transcription start site region 109285
Cpgi3291 11 76570836 to 76571815 979 CpG island CpG island 3291
Tssr109286 11 76571263 to 76571273 10 - TSS region transcription start site region 109286
Tssr109287 11 76571302 to 76571309 7 - TSS region transcription start site region 109287
Tssr109288 11 76571343 to 76571364 21 - TSS region transcription start site region 109288
Tssr109289 11 76571373 to 76571403 30 - TSS region transcription start site region 109289
Tssr109290 11 76571484 to 76571502 18 - TSS region transcription start site region 109290
Tssr109291 11 76571527 to 76571558 31 - TSS region transcription start site region 109291
Tssr109292 11 76571604 to 76571620 16 - TSS region transcription start site region 109292
Tssr109293 11 76571624 to 76571636 12 - TSS region transcription start site region 109293
Tssr109294 11 76577672 to 76577695 23 - TSS region transcription start site region 109294
Tssr109295 11 76577701 to 76577717 16 - TSS region transcription start site region 109295
Tssr109296 11 76578006 to 76578019 13 - TSS region transcription start site region 109296
Tssr109297 11 76578025 to 76578048 23 - TSS region transcription start site region 109297
D11Mit322 11 76579323 to 76579434 111 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 322
Tssr109298 11 76584284 to 76584288 4 - TSS region transcription start site region 109298
Tssr103096 11 76601279 to 76601283 4 + TSS region transcription start site region 103096
Rpl36-ps2 11 76601319 to 76601629 310 + pseudogene ribosomal protein L36, pseudogene 2
Tssr109299 11 76604620 to 76604639 19 - TSS region transcription start site region 109299
Tssr109300 11 76608543 to 76608546 3 - TSS region transcription start site region 109300
Tssr109301 11 76611142 to 76611146 4 - TSS region transcription start site region 109301
Gm26780 11 76614467 to 76622204 7737 + lincRNA gene predicted gene, 26780
Tssr109302 11 76617469 to 76617481 12 - TSS region transcription start site region 109302
Cpgi3292 11 76622014 to 76624057 2043 CpG island CpG island 3292
Gm18373 11 76622208 to 76623197 989 - pseudogene predicted gene, 18373
Tssr109303 11 76622215 to 76622260 45 - TSS region transcription start site region 109303
Tssr103097 11 76622315 to 76622362 47 + TSS region transcription start site region 103097
Tssr109304 11 76623296 to 76623309 13 - TSS region transcription start site region 109304
Tssr109305 11 76623312 to 76623354 42 - TSS region transcription start site region 109305
Tssr109306 11 76623511 to 76623557 46 - TSS region transcription start site region 109306
Gm46288 11 76626653 to 76659995 33342 + lncRNA gene predicted gene, 46288
Cpgi3293 11 76645975 to 76646350 375 CpG island CpG island 3293
Gm36558 11 76661893 to 76662347 454 - lncRNA gene predicted gene, 36558
Cpgi3294 11 76666230 to 76666659 429 CpG island CpG island 3294
Cpgi3295 11 76672267 to 76673524 1257 CpG island CpG island 3295
Tssr103098 11 76672456 to 76672461 5 + TSS region transcription start site region 103098
Bhlha9 11 76672470 to 76673676 1206 + protein coding gene basic helix-loop-helix family, member a9
Tssr103099 11 76679642 to 76679647 5 + TSS region transcription start site region 103099
Tssr103100 11 76679757 to 76679787 30 + TSS region transcription start site region 103100
Tssr103101 11 76679831 to 76679840 9 + TSS region transcription start site region 103101
Trarg1 11 76679873 to 76698664 18791 + protein coding gene trafficking regulator of GLUT4 (SLC2A4) 1
Tssr103102 11 76679900 to 76679903 3 + TSS region transcription start site region 103102
Tssr103103 11 76679905 to 76679922 17 + TSS region transcription start site region 103103
Tssr103104 11 76679961 to 76679990 29 + TSS region transcription start site region 103104
Tssr103105 11 76697501 to 76697505 4 + TSS region transcription start site region 103105
Cpgi3296 11 76700103 to 76700600 497 CpG island CpG island 3296
Gosr1 11 76726602 to 76763579 36977 - protein coding gene golgi SNAP receptor complex member 1
Tssr109307 11 76726907 to 76726912 5 - TSS region transcription start site region 109307