Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:76398986-76589001

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nxn 11 76257226 to 76399141 141915 - protein coding gene nucleoredoxin
Cpgi3287 11 76398112 to 76399481 1369 CpG island CpG island 3287
Tssr109254 11 76399063 to 76399072 9 - TSS region transcription start site region 109254
Tssr109255 11 76399078 to 76399103 25 - TSS region transcription start site region 109255
Tssr109256 11 76399107 to 76399183 76 - TSS region transcription start site region 109256
Gm40199 11 76399225 to 76404297 5072 + lncRNA gene predicted gene, 40199
Cpgi3288 11 76406646 to 76407556 910 CpG island CpG island 3288
Timm22 11 76406952 to 76416292 9340 + protein coding gene translocase of inner mitochondrial membrane 22
Tssr103089 11 76407165 to 76407201 36 + TSS region transcription start site region 103089
Abr 11 76416732 to 76577739 161007 - protein coding gene active BCR-related gene
D11Jcs13 11 76420769 to 76420938 169 DNA segment DNA segment, Chr 11, John C. Schimenti 13
Tssr109257 11 76422255 to 76422268 13 - TSS region transcription start site region 109257
Cpgi3289 11 76436881 to 76437277 396 CpG island CpG island 3289
Tssr109258 11 76437185 to 76437197 12 - TSS region transcription start site region 109258
Tssr109259 11 76437198 to 76437228 30 - TSS region transcription start site region 109259
Tssr103090 11 76454402 to 76454407 5 + TSS region transcription start site region 103090
Tssr109260 11 76468396 to 76468473 77 - TSS region transcription start site region 109260
Tssr109261 11 76468474 to 76468486 12 - TSS region transcription start site region 109261
Tssr109262 11 76479116 to 76479127 11 - TSS region transcription start site region 109262
Tssr109263 11 76479132 to 76479164 32 - TSS region transcription start site region 109263
Tssr109264 11 76479168 to 76479199 31 - TSS region transcription start site region 109264
Tssr109265 11 76479699 to 76479719 20 - TSS region transcription start site region 109265
Tssr109266 11 76479731 to 76479771 40 - TSS region transcription start site region 109266
Tssr103091 11 76493986 to 76494001 15 + TSS region transcription start site region 103091
Cpgi3290 11 76493995 to 76495520 1525 CpG island CpG island 3290
Tssr103092 11 76494027 to 76494045 18 + TSS region transcription start site region 103092
Tssr109267 11 76494395 to 76494438 43 - TSS region transcription start site region 109267
Tssr109268 11 76494494 to 76494547 53 - TSS region transcription start site region 109268
Tssr109269 11 76494597 to 76494609 12 - TSS region transcription start site region 109269
Tssr109270 11 76494622 to 76494640 18 - TSS region transcription start site region 109270
Tssr109271 11 76494643 to 76494683 40 - TSS region transcription start site region 109271
Tssr103093 11 76494720 to 76494737 17 + TSS region transcription start site region 103093
Tssr109272 11 76494860 to 76494883 23 - TSS region transcription start site region 109272
Tssr109273 11 76494895 to 76494915 20 - TSS region transcription start site region 109273
Tssr109274 11 76494950 to 76495034 84 - TSS region transcription start site region 109274
Tssr109275 11 76495290 to 76495308 18 - TSS region transcription start site region 109275
Tssr109276 11 76495364 to 76495403 39 - TSS region transcription start site region 109276
Tssr109277 11 76497772 to 76497794 22 - TSS region transcription start site region 109277
Tssr103094 11 76497999 to 76498014 15 + TSS region transcription start site region 103094
Tssr109278 11 76509208 to 76509228 20 - TSS region transcription start site region 109278
Tssr109279 11 76509231 to 76509240 9 - TSS region transcription start site region 109279
Tssr109280 11 76509257 to 76509307 50 - TSS region transcription start site region 109280
Tssr109281 11 76509338 to 76509352 14 - TSS region transcription start site region 109281
Tssr109282 11 76509421 to 76509435 14 - TSS region transcription start site region 109282
Gm12341 11 76514069 to 76514571 502 + pseudogene predicted gene 12341
Tssr109283 11 76528114 to 76528119 5 - TSS region transcription start site region 109283
Tssr109284 11 76541876 to 76541913 37 - TSS region transcription start site region 109284
Tssr103095 11 76547949 to 76547997 48 + TSS region transcription start site region 103095
Tssr109285 11 76548435 to 76548439 4 - TSS region transcription start site region 109285
Cpgi3291 11 76570836 to 76571815 979 CpG island CpG island 3291
Tssr109286 11 76571263 to 76571273 10 - TSS region transcription start site region 109286
Tssr109287 11 76571302 to 76571309 7 - TSS region transcription start site region 109287
Tssr109288 11 76571343 to 76571364 21 - TSS region transcription start site region 109288
Tssr109289 11 76571373 to 76571403 30 - TSS region transcription start site region 109289
Tssr109290 11 76571484 to 76571502 18 - TSS region transcription start site region 109290
Tssr109291 11 76571527 to 76571558 31 - TSS region transcription start site region 109291
Tssr109292 11 76571604 to 76571620 16 - TSS region transcription start site region 109292
Tssr109293 11 76571624 to 76571636 12 - TSS region transcription start site region 109293
Tssr109294 11 76577672 to 76577695 23 - TSS region transcription start site region 109294
Tssr109295 11 76577701 to 76577717 16 - TSS region transcription start site region 109295
Tssr109296 11 76578006 to 76578019 13 - TSS region transcription start site region 109296
Tssr109297 11 76578025 to 76578048 23 - TSS region transcription start site region 109297
D11Mit322 11 76579323 to 76579434 111 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 322
Tssr109298 11 76584284 to 76584288 4 - TSS region transcription start site region 109298