Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Ctrq3 | 11 | 32224720 | QTL | C. trachomatis resistance QTL 3 | ||
nmf420 | 11 | 18364202 | heritable phenotypic marker | neuroscience mutagenesis facility, 420 | ||
Nxn | 11 | 141915 | - | protein coding gene | nucleoredoxin | |
D11Jcs11 | 11 | 248 | DNA segment | DNA segment, Chr 11, John C. Schimenti 11 | ||
C230071I02Rik | 11 | 7142 | unclassified gene | RIKEN cDNA C230071I02 gene | ||
Tssr109252 | 11 | 3 | - | TSS region | transcription start site region 109252 | |
Tssr109253 | 11 | 8 | - | TSS region | transcription start site region 109253 | |
Cpgi3286 | 11 | 187 | CpG island | CpG island 3286 | ||
Cpgi3287 | 11 | 1369 | CpG island | CpG island 3287 | ||
Tssr109254 | 11 | 9 | - | TSS region | transcription start site region 109254 | |
Tssr109255 | 11 | 25 | - | TSS region | transcription start site region 109255 | |
Tssr109256 | 11 | 76 | - | TSS region | transcription start site region 109256 | |
Gm40199 | 11 | 5072 | + | lncRNA gene | predicted gene, 40199 | |
Cpgi3288 | 11 | 910 | CpG island | CpG island 3288 | ||
Timm22 | 11 | 9340 | + | protein coding gene | translocase of inner mitochondrial membrane 22 | |
Tssr103089 | 11 | 36 | + | TSS region | transcription start site region 103089 | |
Abr | 11 | 161007 | - | protein coding gene | active BCR-related gene | |
D11Jcs13 | 11 | 169 | DNA segment | DNA segment, Chr 11, John C. Schimenti 13 | ||
Tssr109257 | 11 | 13 | - | TSS region | transcription start site region 109257 | |
Cpgi3289 | 11 | 396 | CpG island | CpG island 3289 | ||
Tssr109258 | 11 | 12 | - | TSS region | transcription start site region 109258 | |
Tssr109259 | 11 | 30 | - | TSS region | transcription start site region 109259 | |
Tssr103090 | 11 | 5 | + | TSS region | transcription start site region 103090 | |
Tssr109260 | 11 | 77 | - | TSS region | transcription start site region 109260 | |
Tssr109261 | 11 | 12 | - | TSS region | transcription start site region 109261 | |
Tssr109262 | 11 | 11 | - | TSS region | transcription start site region 109262 | |
Tssr109263 | 11 | 32 | - | TSS region | transcription start site region 109263 | |
Tssr109264 | 11 | 31 | - | TSS region | transcription start site region 109264 | |
Tssr109265 | 11 | 20 | - | TSS region | transcription start site region 109265 | |
Tssr109266 | 11 | 40 | - | TSS region | transcription start site region 109266 | |
Tssr103091 | 11 | 15 | + | TSS region | transcription start site region 103091 | |
Cpgi3290 | 11 | 1525 | CpG island | CpG island 3290 | ||
Tssr103092 | 11 | 18 | + | TSS region | transcription start site region 103092 | |
Tssr109267 | 11 | 43 | - | TSS region | transcription start site region 109267 | |
Tssr109268 | 11 | 53 | - | TSS region | transcription start site region 109268 | |
Tssr109269 | 11 | 12 | - | TSS region | transcription start site region 109269 | |
Tssr109270 | 11 | 18 | - | TSS region | transcription start site region 109270 | |
Tssr109271 | 11 | 40 | - | TSS region | transcription start site region 109271 | |
Tssr103093 | 11 | 17 | + | TSS region | transcription start site region 103093 | |
Tssr109272 | 11 | 23 | - | TSS region | transcription start site region 109272 | |
Tssr109273 | 11 | 20 | - | TSS region | transcription start site region 109273 | |
Tssr109274 | 11 | 84 | - | TSS region | transcription start site region 109274 | |
Tssr109275 | 11 | 18 | - | TSS region | transcription start site region 109275 | |
Tssr109276 | 11 | 39 | - | TSS region | transcription start site region 109276 | |
Tssr109277 | 11 | 22 | - | TSS region | transcription start site region 109277 | |
Tssr103094 | 11 | 15 | + | TSS region | transcription start site region 103094 | |
Tssr109278 | 11 | 20 | - | TSS region | transcription start site region 109278 | |
Tssr109279 | 11 | 9 | - | TSS region | transcription start site region 109279 | |
Tssr109280 | 11 | 50 | - | TSS region | transcription start site region 109280 | |
Tssr109281 | 11 | 14 | - | TSS region | transcription start site region 109281 | |
Tssr109282 | 11 | 14 | - | TSS region | transcription start site region 109282 | |
Gm12341 | 11 | 502 | + | pseudogene | predicted gene 12341 | |
Tssr109283 | 11 | 5 | - | TSS region | transcription start site region 109283 | |
Tssr109284 | 11 | 37 | - | TSS region | transcription start site region 109284 | |
Tssr103095 | 11 | 48 | + | TSS region | transcription start site region 103095 | |
Tssr109285 | 11 | 4 | - | TSS region | transcription start site region 109285 | |
Cpgi3291 | 11 | 979 | CpG island | CpG island 3291 | ||
Tssr109286 | 11 | 10 | - | TSS region | transcription start site region 109286 | |
Tssr109287 | 11 | 7 | - | TSS region | transcription start site region 109287 | |
Tssr109288 | 11 | 21 | - | TSS region | transcription start site region 109288 | |
Tssr109289 | 11 | 30 | - | TSS region | transcription start site region 109289 | |
Tssr109290 | 11 | 18 | - | TSS region | transcription start site region 109290 | |
Tssr109291 | 11 | 31 | - | TSS region | transcription start site region 109291 | |
Tssr109292 | 11 | 16 | - | TSS region | transcription start site region 109292 | |
Tssr109293 | 11 | 12 | - | TSS region | transcription start site region 109293 | |
Tssr109294 | 11 | 23 | - | TSS region | transcription start site region 109294 | |
Tssr109295 | 11 | 16 | - | TSS region | transcription start site region 109295 | |
Tssr109296 | 11 | 13 | - | TSS region | transcription start site region 109296 | |
Tssr109297 | 11 | 23 | - | TSS region | transcription start site region 109297 | |
D11Mit322 | 11 | 111 | DNA segment | DNA Segment, Chr 11, Massachusetts Institute of Technology 322 | ||
Tssr109298 | 11 | 4 | - | TSS region | transcription start site region 109298 | |
Tssr103096 | 11 | 4 | + | TSS region | transcription start site region 103096 | |
Rpl36-ps2 | 11 | 310 | + | pseudogene | ribosomal protein L36, pseudogene 2 | |
Tssr109299 | 11 | 19 | - | TSS region | transcription start site region 109299 | |
Tssr109300 | 11 | 3 | - | TSS region | transcription start site region 109300 | |
Tssr109301 | 11 | 4 | - | TSS region | transcription start site region 109301 | |
Gm26780 | 11 | 7737 | + | lincRNA gene | predicted gene, 26780 | |
Tssr109302 | 11 | 12 | - | TSS region | transcription start site region 109302 | |
Cpgi3292 | 11 | 2043 | CpG island | CpG island 3292 | ||
Gm18373 | 11 | 989 | - | pseudogene | predicted gene, 18373 | |
Tssr109303 | 11 | 45 | - | TSS region | transcription start site region 109303 | |
Tssr103097 | 11 | 47 | + | TSS region | transcription start site region 103097 | |
Tssr109304 | 11 | 13 | - | TSS region | transcription start site region 109304 | |
Tssr109305 | 11 | 42 | - | TSS region | transcription start site region 109305 | |
Tssr109306 | 11 | 46 | - | TSS region | transcription start site region 109306 | |
Gm46288 | 11 | 33342 | + | lncRNA gene | predicted gene, 46288 | |
Cpgi3293 | 11 | 375 | CpG island | CpG island 3293 | ||
Gm36558 | 11 | 454 | - | lncRNA gene | predicted gene, 36558 | |
Cpgi3294 | 11 | 429 | CpG island | CpG island 3294 | ||
Cpgi3295 | 11 | 1257 | CpG island | CpG island 3295 | ||
Tssr103098 | 11 | 5 | + | TSS region | transcription start site region 103098 | |
Bhlha9 | 11 | 1206 | + | protein coding gene | basic helix-loop-helix family, member a9 | |
Tssr103099 | 11 | 5 | + | TSS region | transcription start site region 103099 | |
Tssr103100 | 11 | 30 | + | TSS region | transcription start site region 103100 | |
Tssr103101 | 11 | 9 | + | TSS region | transcription start site region 103101 | |
Trarg1 | 11 | 18791 | + | protein coding gene | trafficking regulator of GLUT4 (SLC2A4) 1 | |
Tssr103102 | 11 | 3 | + | TSS region | transcription start site region 103102 | |
Tssr103103 | 11 | 17 | + | TSS region | transcription start site region 103103 | |
Tssr103104 | 11 | 29 | + | TSS region | transcription start site region 103104 | |
Tssr103105 | 11 | 4 | + | TSS region | transcription start site region 103105 | |
Cpgi3296 | 11 | 497 | CpG island | CpG island 3296 | ||
Gosr1 | 11 | 36977 | - | protein coding gene | golgi SNAP receptor complex member 1 | |
Tssr109307 | 11 | 5 | - | TSS region | transcription start site region 109307 | |
Tssr109308 | 11 | 26 | - | TSS region | transcription start site region 109308 | |
Cpgi3297 | 11 | 206 | CpG island | CpG island 3297 | ||
Tssr109309 | 11 | 32 | - | TSS region | transcription start site region 109309 | |
Cpd | 11 | 68594 | - | protein coding gene | carboxypeptidase D | |
Tssr109310 | 11 | 20 | - | TSS region | transcription start site region 109310 | |
Tssr109311 | 11 | 19 | - | TSS region | transcription start site region 109311 | |
Tssr109312 | 11 | 15 | - | TSS region | transcription start site region 109312 | |
Tssr109313 | 11 | 4 | - | TSS region | transcription start site region 109313 | |
Tssr109314 | 11 | 12 | - | TSS region | transcription start site region 109314 | |
Tssr109315 | 11 | 3 | - | TSS region | transcription start site region 109315 | |
Tssr103106 | 11 | 4 | + | TSS region | transcription start site region 103106 | |
Cpgi3298 | 11 | 1187 | CpG island | CpG island 3298 | ||
Tssr103107 | 11 | 16 | + | TSS region | transcription start site region 103107 | |
Tssr109316 | 11 | 77 | - | TSS region | transcription start site region 109316 | |
Tssr109317 | 11 | 5 | - | TSS region | transcription start site region 109317 | |
Gm40200 | 11 | 11407 | + | lncRNA gene | predicted gene, 40200 | |
Tssr103108 | 11 | 21 | + | TSS region | transcription start site region 103108 | |
Tssr103109 | 11 | 20 | + | TSS region | transcription start site region 103109 | |
Tssr103110 | 11 | 11 | + | TSS region | transcription start site region 103110 | |
D11Mit372 | 11 | 137 | DNA segment | DNA Segment, Chr 11, Massachusetts Institute of Technology-372 | ||
D11Mit299 | 11 | 124 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 299 | ||
Tssr3580 | 11 | 17 | + | TSS region | transcription start site region 3580 | |
Tssr103111 | 11 | 15 | + | TSS region | transcription start site region 103111 | |
Tmigd1 | 11 | 14428 | + | protein coding gene | transmembrane and immunoglobulin domain containing 1 | |
Tssr103112 | 11 | 6 | + | TSS region | transcription start site region 103112 | |
Tssr103113 | 11 | 3 | + | TSS region | transcription start site region 103113 | |
Tssr3581 | 11 | 3 | + | TSS region | transcription start site region 3581 | |
Tssr103114 | 11 | 19 | + | TSS region | transcription start site region 103114 | |
Tssr103115 | 11 | 56 | + | TSS region | transcription start site region 103115 | |
D11Mit244 | 11 | 89 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 244 | ||
Tssr103116 | 11 | 4 | + | TSS region | transcription start site region 103116 | |
D11Mit116 | 11 | 134 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 116 | ||
Cpgi3299 | 11 | 721 | CpG island | CpG island 3299 | ||
Blmh | 11 | 41733 | + | protein coding gene | bleomycin hydrolase | |
Tssr103117 | 11 | 11 | + | TSS region | transcription start site region 103117 | |
Tssr103118 | 11 | 11 | + | TSS region | transcription start site region 103118 | |
Tssr103119 | 11 | 72 | + | TSS region | transcription start site region 103119 | |
Tssr103120 | 11 | 9 | + | TSS region | transcription start site region 103120 | |
D11Mit245 | 11 | 147 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 245 | ||
Gm22611 | 11 | 149 | + | snRNA gene | predicted gene, 22611 | |
Cpgi3300 | 11 | 527 | CpG island | CpG island 3300 | ||
Cpgi3301 | 11 | 914 | CpG island | CpG island 3301 | ||
Tssr103121 | 11 | 5 | + | TSS region | transcription start site region 103121 | |
Slc6a4 | 11 | 33737 | + | protein coding gene | solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 | |
Gm12343 | 11 | 959 | - | antisense lncRNA gene | predicted gene 12343 | |
Tssr109318 | 11 | 15 | - | TSS region | transcription start site region 109318 | |
Tssr103122 | 11 | 11 | + | TSS region | transcription start site region 103122 | |
Tssr103123 | 11 | 15 | + | TSS region | transcription start site region 103123 | |
Nsrp1 | 11 | 34143 | - | protein coding gene | nuclear speckle regulatory protein 1 | |
Tssr109319 | 11 | 12 | - | TSS region | transcription start site region 109319 | |
Tssr109320 | 11 | 18 | - | TSS region | transcription start site region 109320 | |
Gm22772 | 11 | 120 | + | snoRNA gene | predicted gene, 22772 | |
D11Mit280 | 11 | 109 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 280 | ||
Cpgi3302 | 11 | 801 | CpG island | CpG island 3302 | ||
Mir423 | 11 | 108 | - | miRNA gene | microRNA 423 | |
Tssr109321 | 11 | 38 | - | TSS region | transcription start site region 109321 | |
Tssr103124 | 11 | 29 | + | TSS region | transcription start site region 103124 | |
Tssr3582 | 11 | 20 | + | TSS region | transcription start site region 3582 | |
Tssr3583 | 11 | 12 | + | TSS region | transcription start site region 3583 | |
Efcab5 | 11 | 99053 | - | protein coding gene | EF-hand calcium binding domain 5 | |
Gm12344 | 11 | 328 | - | pseudogene | predicted gene 12344 | |
Gm12345 | 11 | 897 | + | pseudogene | predicted gene 12345 | |
Gm45027 | 11 | 694 | - | lincRNA gene | predicted gene 45027 | |
Tssr109322 | 11 | 4 | - | TSS region | transcription start site region 109322 | |
Tssr109323 | 11 | 20 | - | TSS region | transcription start site region 109323 | |
Tssr109324 | 11 | 7 | - | TSS region | transcription start site region 109324 | |
Tssr3584 | 11 | 3 | - | TSS region | transcription start site region 3584 | |
Tssr109325 | 11 | 16 | - | TSS region | transcription start site region 109325 | |
Tssr109326 | 11 | 5 | - | TSS region | transcription start site region 109326 | |
6330571C24Rik | 11 | 1229 | lncRNA gene | RIKEN cDNA 6330571C24 gene | ||
Cpgi3303 | 11 | 1347 | CpG island | CpG island 3303 | ||
Tssr103125 | 11 | 7 | + | TSS region | transcription start site region 103125 | |
Tssr103126 | 11 | 99 | + | TSS region | transcription start site region 103126 | |
Ssh2 | 11 | 243933 | + | protein coding gene | slingshot protein phosphatase 2 | |
Tssr103127 | 11 | 4 | + | TSS region | transcription start site region 103127 | |
Gm24989 | 11 | 87 | - | snoRNA gene | predicted gene, 24989 | |
Tssr103128 | 11 | 1 | + | TSS region | transcription start site region 103128 | |
Gm12346 | 11 | 2454 | + | pseudogene | predicted gene 12346 | |
Tssr103129 | 11 | 4 | + | TSS region | transcription start site region 103129 | |
Tssr103130 | 11 | 46 | + | TSS region | transcription start site region 103130 | |
Tssr103131 | 11 | 4 | + | TSS region | transcription start site region 103131 | |
Cpgi3304 | 11 | 750 | CpG island | CpG island 3304 | ||
Tssr103132 | 11 | 10 | + | TSS region | transcription start site region 103132 | |
Tssr103133 | 11 | 20 | + | TSS region | transcription start site region 103133 | |
Tssr103134 | 11 | 11 | + | TSS region | transcription start site region 103134 | |
Tssr109327 | 11 | 14 | - | TSS region | transcription start site region 109327 | |
Gm30976 | 11 | 8510 | - | pseudogene | predicted gene, 30976 | |
Tssr103135 | 11 | 12 | + | TSS region | transcription start site region 103135 | |
Cpgi3305 | 11 | 1191 | CpG island | CpG island 3305 | ||
Tssr103136 | 11 | 96 | + | TSS region | transcription start site region 103136 | |
Coro6 | 11 | 8073 | + | protein coding gene | coronin 6 | |
Tssr103137 | 11 | 12 | + | TSS region | transcription start site region 103137 | |
Tssr103138 | 11 | 7 | + | TSS region | transcription start site region 103138 | |
Tssr103139 | 11 | 29 | + | TSS region | transcription start site region 103139 | |
Tssr103140 | 11 | 47 | + | TSS region | transcription start site region 103140 | |
Cpgi3306 | 11 | 1173 | CpG island | CpG island 3306 | ||
Cpgi3307 | 11 | 435 | CpG island | CpG island 3307 |