Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:75949912-76053569

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr103067	11	75960994 to 75961019	25	+	TSS region	transcription start site region 103067
Cpgi3278	11	75965965 to 75967354	1389		CpG island	CpG island 3278
Cpgi3279	11	75999645 to 76000301	656		CpG island	CpG island 3279
1700016K19Rik	11	75999912 to 76003569	3657	+	protein coding gene	RIKEN cDNA 1700016K19 gene
Tssr103068	11	75999928 to 75999946	18	+	TSS region	transcription start site region 103068
Tssr103069	11	75999952 to 75999977	25	+	TSS region	transcription start site region 103069
Tssr103070	11	75999980 to 75999994	14	+	TSS region	transcription start site region 103070
Tssr103071	11	76000006 to 76000011	5	+	TSS region	transcription start site region 103071
Tssr103072	11	76000016 to 76000023	7	+	TSS region	transcription start site region 103072
D11Bhm23	11	76010823 to 76010946	123		DNA segment	DNA segment, Chr 11, Boehm 23
Tssr103073	11	76012134 to 76012135	1	+	TSS region	transcription start site region 103073
Tssr109235	11	76015428 to 76015445	17	-	TSS region	transcription start site region 109235
Tssr109236	11	76015454 to 76015467	13	-	TSS region	transcription start site region 109236
Rflnb	11	76019194 to 76027782	8588	-	protein coding gene	refilin B
D11Jcs9	11	76021500 to 76021715	215		DNA segment	DNA segment, Chr 11, John C. Schimenti 9
Cpgi3280	11	76026938 to 76028393	1455		CpG island	CpG island 3280
Tssr109237	11	76027726 to 76027802	76	-	TSS region	transcription start site region 109237
Vps53	11	76046226 to 76179630	133404	-	protein coding gene	VPS53 GARP complex subunit