Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:75785901-76065946

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Doc2b 11 75768966 to 75796049 27083 - protein coding gene double C2, beta
Cpgi3277 11 75794623 to 75797007 2384 CpG island CpG island 3277
Gm12339 11 75794768 to 75825241 30473 + lncRNA gene predicted gene 12339
Tssr109226 11 75796032 to 75796037 5 - TSS region transcription start site region 109226
Tssr109227 11 75796048 to 75796081 33 - TSS region transcription start site region 109227
Rph3al 11 75830999 to 75938429 107430 - protein coding gene rabphilin 3A-like (without C2 domains)
Tssr109228 11 75847696 to 75847702 6 - TSS region transcription start site region 109228
Gm16075 11 75860969 to 75861494 525 + antisense lncRNA gene predicted gene 16075
Tssr109229 11 75906673 to 75906684 11 - TSS region transcription start site region 109229
Tssr109230 11 75906688 to 75906714 26 - TSS region transcription start site region 109230
Tssr109231 11 75925901 to 75925946 45 - TSS region transcription start site region 109231
Tssr109232 11 75926491 to 75926499 8 - TSS region transcription start site region 109232
Tssr109233 11 75937677 to 75937722 45 - TSS region transcription start site region 109233
Tssr109234 11 75937726 to 75937752 26 - TSS region transcription start site region 109234
Tssr103067 11 75960994 to 75961019 25 + TSS region transcription start site region 103067
Cpgi3278 11 75965965 to 75967354 1389 CpG island CpG island 3278
Cpgi3279 11 75999645 to 76000301 656 CpG island CpG island 3279
1700016K19Rik 11 75999912 to 76003569 3657 + protein coding gene RIKEN cDNA 1700016K19 gene
Tssr103068 11 75999928 to 75999946 18 + TSS region transcription start site region 103068
Tssr103069 11 75999952 to 75999977 25 + TSS region transcription start site region 103069
Tssr103070 11 75999980 to 75999994 14 + TSS region transcription start site region 103070
Tssr103071 11 76000006 to 76000011 5 + TSS region transcription start site region 103071
Tssr103072 11 76000016 to 76000023 7 + TSS region transcription start site region 103072
D11Bhm23 11 76010823 to 76010946 123 DNA segment DNA segment, Chr 11, Boehm 23
Tssr103073 11 76012134 to 76012135 1 + TSS region transcription start site region 103073
Tssr109235 11 76015428 to 76015445 17 - TSS region transcription start site region 109235
Tssr109236 11 76015454 to 76015467 13 - TSS region transcription start site region 109236
Rflnb 11 76019194 to 76027782 8588 - protein coding gene refilin B
D11Jcs9 11 76021500 to 76021715 215 DNA segment DNA segment, Chr 11, John C. Schimenti 9
Cpgi3280 11 76026938 to 76028393 1455 CpG island CpG island 3280
Tssr109237 11 76027726 to 76027802 76 - TSS region transcription start site region 109237
Vps53 11 76046226 to 76179630 133404 - protein coding gene VPS53 GARP complex subunit