Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:75725994-76196019

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hlb290 11 36391750 to 76087800 39696050 heritable phenotypic marker heart, lung and blood, 290
D11Bhm22 11 75729816 to 75729996 180 DNA segment DNA segment, Chr 11, Boehm 22
Cpgi3275 11 75732538 to 75733787 1249 CpG island CpG island 3275
Ywhae 11 75732887 to 75765841 32954 + protein coding gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
Tssr103037 11 75732908 to 75732975 67 + TSS region transcription start site region 103037
Tssr103038 11 75733037 to 75733043 6 + TSS region transcription start site region 103038
Tssr103039 11 75734570 to 75734575 5 + TSS region transcription start site region 103039
Tssr103040 11 75742246 to 75742262 16 + TSS region transcription start site region 103040
Gm26836 11 75745072 to 75761195 16123 - lincRNA gene predicted gene, 26836
Tssr103041 11 75747446 to 75747486 40 + TSS region transcription start site region 103041
Tssr109223 11 75751906 to 75751945 39 - TSS region transcription start site region 109223
Tssr103042 11 75751947 to 75752007 60 + TSS region transcription start site region 103042
Tssr103043 11 75752034 to 75752057 23 + TSS region transcription start site region 103043
Tssr103044 11 75754865 to 75754869 4 + TSS region transcription start site region 103044
Tssr103045 11 75755565 to 75755628 63 + TSS region transcription start site region 103045
Tssr103046 11 75756809 to 75756847 38 + TSS region transcription start site region 103046
Tssr103047 11 75756861 to 75756936 75 + TSS region transcription start site region 103047
Tssr109224 11 75756863 to 75756893 30 - TSS region transcription start site region 109224
Tssr103048 11 75756948 to 75756974 26 + TSS region transcription start site region 103048
Tssr103049 11 75756976 to 75757002 26 + TSS region transcription start site region 103049
Tssr103050 11 75758838 to 75758851 13 + TSS region transcription start site region 103050
Tssr103051 11 75758878 to 75758889 11 + TSS region transcription start site region 103051
Tssr103052 11 75758900 to 75758907 7 + TSS region transcription start site region 103052
Tssr103053 11 75759290 to 75759336 46 + TSS region transcription start site region 103053
Tssr103054 11 75759339 to 75759397 58 + TSS region transcription start site region 103054
Tssr103055 11 75764628 to 75764639 11 + TSS region transcription start site region 103055
Tssr109225 11 75764667 to 75764727 60 - TSS region transcription start site region 109225
Tssr103056 11 75764676 to 75764752 76 + TSS region transcription start site region 103056
Tssr103057 11 75764763 to 75764800 37 + TSS region transcription start site region 103057
Tssr103058 11 75764832 to 75764847 15 + TSS region transcription start site region 103058
Tssr103059 11 75764966 to 75764984 18 + TSS region transcription start site region 103059
Tssr103060 11 75765092 to 75765104 12 + TSS region transcription start site region 103060
Tssr103061 11 75765190 to 75765201 11 + TSS region transcription start site region 103061
Tssr103062 11 75765288 to 75765299 11 + TSS region transcription start site region 103062
Tssr103063 11 75765338 to 75765349 11 + TSS region transcription start site region 103063
Tssr103064 11 75765362 to 75765373 11 + TSS region transcription start site region 103064
Tssr103065 11 75765376 to 75765386 10 + TSS region transcription start site region 103065
Tssr103066 11 75765389 to 75765415 26 + TSS region transcription start site region 103066
Tssr3579 11 75765484 to 75765499 15 + TSS region transcription start site region 3579
Doc2b 11 75768966 to 75796049 27083 - protein coding gene double C2, beta
Cpgi3276 11 75769178 to 75769349 171 CpG island CpG island 3276
D11Jcs8 11 75784856 to 75785034 178 DNA segment DNA segment, Chr 11, John C. Schimenti 8
Cpgi3277 11 75794623 to 75797007 2384 CpG island CpG island 3277
Gm12339 11 75794768 to 75825241 30473 + lncRNA gene predicted gene 12339
Tssr109226 11 75796032 to 75796037 5 - TSS region transcription start site region 109226
Tssr109227 11 75796048 to 75796081 33 - TSS region transcription start site region 109227
Rph3al 11 75830999 to 75938429 107430 - protein coding gene rabphilin 3A-like (without C2 domains)
Tssr109228 11 75847696 to 75847702 6 - TSS region transcription start site region 109228
Gm16075 11 75860969 to 75861494 525 + antisense lncRNA gene predicted gene 16075
Tssr109229 11 75906673 to 75906684 11 - TSS region transcription start site region 109229
Tssr109230 11 75906688 to 75906714 26 - TSS region transcription start site region 109230
Tssr109231 11 75925901 to 75925946 45 - TSS region transcription start site region 109231
Tssr109232 11 75926491 to 75926499 8 - TSS region transcription start site region 109232
Tssr109233 11 75937677 to 75937722 45 - TSS region transcription start site region 109233
Tssr109234 11 75937726 to 75937752 26 - TSS region transcription start site region 109234
Tssr103067 11 75960994 to 75961019 25 + TSS region transcription start site region 103067
Cpgi3278 11 75965965 to 75967354 1389 CpG island CpG island 3278
Cpgi3279 11 75999645 to 76000301 656 CpG island CpG island 3279
1700016K19Rik 11 75999912 to 76003569 3657 + protein coding gene RIKEN cDNA 1700016K19 gene
Tssr103068 11 75999928 to 75999946 18 + TSS region transcription start site region 103068
Tssr103069 11 75999952 to 75999977 25 + TSS region transcription start site region 103069
Tssr103070 11 75999980 to 75999994 14 + TSS region transcription start site region 103070
Tssr103071 11 76000006 to 76000011 5 + TSS region transcription start site region 103071
Tssr103072 11 76000016 to 76000023 7 + TSS region transcription start site region 103072
D11Bhm23 11 76010823 to 76010946 123 DNA segment DNA segment, Chr 11, Boehm 23
Tssr103073 11 76012134 to 76012135 1 + TSS region transcription start site region 103073
Tssr109235 11 76015428 to 76015445 17 - TSS region transcription start site region 109235
Tssr109236 11 76015454 to 76015467 13 - TSS region transcription start site region 109236
Rflnb 11 76019194 to 76027782 8588 - protein coding gene refilin B
D11Jcs9 11 76021500 to 76021715 215 DNA segment DNA segment, Chr 11, John C. Schimenti 9
Cpgi3280 11 76026938 to 76028393 1455 CpG island CpG island 3280
Tssr109237 11 76027726 to 76027802 76 - TSS region transcription start site region 109237
Vps53 11 76046226 to 76179630 133404 - protein coding gene VPS53 GARP complex subunit
Tssr109238 11 76069684 to 76069687 3 - TSS region transcription start site region 109238
D11Mit7 11 76087654 to 76087800 146 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 7
Tssr103074 11 76089430 to 76089439 9 + TSS region transcription start site region 103074
D11Mit321 11 76098373 to 76098570 197 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 321
D11Bhm25 11 76101924 to 76102198 274 DNA segment DNA segment, Chr 11, Boehm 25
Tssr109239 11 76126700 to 76126704 4 - TSS region transcription start site region 109239
Tssr103075 11 76133944 to 76133947 3 + TSS region transcription start site region 103075
Tssr103076 11 76133965 to 76133979 14 + TSS region transcription start site region 103076
Tssr103077 11 76133985 to 76133996 11 + TSS region transcription start site region 103077
Gm12340 11 76144258 to 76144719 461 + pseudogene predicted gene 12340
Gm46252 11 76149956 to 76174620 24664 + lncRNA gene predicted gene, 46252
D11Bhm27 11 76153990 to 76154137 147 DNA segment DNA segment, Chr 11, Boehm 27
Tssr109240 11 76154957 to 76154989 32 - TSS region transcription start site region 109240
Tssr109241 11 76161466 to 76161506 40 - TSS region transcription start site region 109241
D11Bhm28 11 76165031 to 76165221 190 DNA segment DNA segment, Chr 11, Boehm 28
Tssr109242 11 76174443 to 76174447 4 - TSS region transcription start site region 109242
Cpgi3281 11 76178942 to 76180008 1066 CpG island CpG island 3281
Tssr109243 11 76179596 to 76179649 53 - TSS region transcription start site region 109243
Tssr103078 11 76179658 to 76179696 38 + TSS region transcription start site region 103078