Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:75653878-75863889

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myo1c 11 75650504 to 75673910 23406 + protein coding gene myosin IC
Cpgi3272 11 75653737 to 75654716 979 CpG island CpG island 3272
Cpgi3273 11 75655473 to 75656587 1114 CpG island CpG island 3273
Tssr103026 11 75655751 to 75655775 24 + TSS region transcription start site region 103026
Tssr103027 11 75655845 to 75655856 11 + TSS region transcription start site region 103027
Tssr103028 11 75655911 to 75655918 7 + TSS region transcription start site region 103028
Tssr103029 11 75655928 to 75655937 9 + TSS region transcription start site region 103029
Tssr103030 11 75655979 to 75656000 21 + TSS region transcription start site region 103030
Tssr103031 11 75656003 to 75656037 34 + TSS region transcription start site region 103031
Tssr103032 11 75656103 to 75656177 74 + TSS region transcription start site region 103032
Tssr103033 11 75661614 to 75661623 9 + TSS region transcription start site region 103033
Cpgi3274 11 75678827 to 75680010 1183 CpG island CpG island 3274
Crk 11 75679259 to 75706908 27649 + protein coding gene v-crk avian sarcoma virus CT10 oncogene homolog
Tssr103034 11 75679269 to 75679327 58 + TSS region transcription start site region 103034
Tssr103035 11 75679628 to 75679637 9 + TSS region transcription start site region 103035
Tssr103036 11 75692602 to 75692620 18 + TSS region transcription start site region 103036
D11Bhm22 11 75729816 to 75729996 180 DNA segment DNA segment, Chr 11, Boehm 22
Cpgi3275 11 75732538 to 75733787 1249 CpG island CpG island 3275
Ywhae 11 75732887 to 75765841 32954 + protein coding gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
Tssr103037 11 75732908 to 75732975 67 + TSS region transcription start site region 103037
Tssr103038 11 75733037 to 75733043 6 + TSS region transcription start site region 103038
Tssr103039 11 75734570 to 75734575 5 + TSS region transcription start site region 103039
Tssr103040 11 75742246 to 75742262 16 + TSS region transcription start site region 103040
Gm26836 11 75745072 to 75761195 16123 - lincRNA gene predicted gene, 26836
Tssr103041 11 75747446 to 75747486 40 + TSS region transcription start site region 103041
Tssr109223 11 75751906 to 75751945 39 - TSS region transcription start site region 109223
Tssr103042 11 75751947 to 75752007 60 + TSS region transcription start site region 103042
Tssr103043 11 75752034 to 75752057 23 + TSS region transcription start site region 103043
Tssr103044 11 75754865 to 75754869 4 + TSS region transcription start site region 103044
Tssr103045 11 75755565 to 75755628 63 + TSS region transcription start site region 103045
Tssr103046 11 75756809 to 75756847 38 + TSS region transcription start site region 103046
Tssr103047 11 75756861 to 75756936 75 + TSS region transcription start site region 103047
Tssr109224 11 75756863 to 75756893 30 - TSS region transcription start site region 109224
Tssr103048 11 75756948 to 75756974 26 + TSS region transcription start site region 103048
Tssr103049 11 75756976 to 75757002 26 + TSS region transcription start site region 103049
Tssr103050 11 75758838 to 75758851 13 + TSS region transcription start site region 103050
Tssr103051 11 75758878 to 75758889 11 + TSS region transcription start site region 103051
Tssr103052 11 75758900 to 75758907 7 + TSS region transcription start site region 103052
Tssr103053 11 75759290 to 75759336 46 + TSS region transcription start site region 103053
Tssr103054 11 75759339 to 75759397 58 + TSS region transcription start site region 103054
Tssr103055 11 75764628 to 75764639 11 + TSS region transcription start site region 103055
Tssr109225 11 75764667 to 75764727 60 - TSS region transcription start site region 109225
Tssr103056 11 75764676 to 75764752 76 + TSS region transcription start site region 103056
Tssr103057 11 75764763 to 75764800 37 + TSS region transcription start site region 103057
Tssr103058 11 75764832 to 75764847 15 + TSS region transcription start site region 103058
Tssr103059 11 75764966 to 75764984 18 + TSS region transcription start site region 103059
Tssr103060 11 75765092 to 75765104 12 + TSS region transcription start site region 103060
Tssr103061 11 75765190 to 75765201 11 + TSS region transcription start site region 103061
Tssr103062 11 75765288 to 75765299 11 + TSS region transcription start site region 103062
Tssr103063 11 75765338 to 75765349 11 + TSS region transcription start site region 103063
Tssr103064 11 75765362 to 75765373 11 + TSS region transcription start site region 103064
Tssr103065 11 75765376 to 75765386 10 + TSS region transcription start site region 103065
Tssr103066 11 75765389 to 75765415 26 + TSS region transcription start site region 103066
Tssr3579 11 75765484 to 75765499 15 + TSS region transcription start site region 3579
Doc2b 11 75768966 to 75796049 27083 - protein coding gene double C2, beta
Cpgi3276 11 75769178 to 75769349 171 CpG island CpG island 3276
D11Jcs8 11 75784856 to 75785034 178 DNA segment DNA segment, Chr 11, John C. Schimenti 8
Cpgi3277 11 75794623 to 75797007 2384 CpG island CpG island 3277
Gm12339 11 75794768 to 75825241 30473 + lncRNA gene predicted gene 12339
Tssr109226 11 75796032 to 75796037 5 - TSS region transcription start site region 109226
Tssr109227 11 75796048 to 75796081 33 - TSS region transcription start site region 109227
Rph3al 11 75830999 to 75938429 107430 - protein coding gene rabphilin 3A-like (without C2 domains)
Tssr109228 11 75847696 to 75847702 6 - TSS region transcription start site region 109228
Gm16075 11 75860969 to 75861494 525 + antisense lncRNA gene predicted gene 16075