Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:75624628-75734637

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pitpna 11 75588097 to 75628804 40707 + protein coding gene phosphatidylinositol transfer protein, alpha
Tssr103006 11 75626291 to 75626329 38 + TSS region transcription start site region 103006
Tssr109220 11 75626717 to 75626733 16 - TSS region transcription start site region 109220
Cpgi3270 11 75630554 to 75631378 824 CpG island CpG island 3270
Tssr109221 11 75630722 to 75630763 41 - TSS region transcription start site region 109221
Tssr103007 11 75630759 to 75630770 11 + TSS region transcription start site region 103007
Tssr103008 11 75630774 to 75630803 29 + TSS region transcription start site region 103008
Tssr109222 11 75630798 to 75630807 9 - TSS region transcription start site region 109222
Tssr3577 11 75630805 to 75630811 6 + TSS region transcription start site region 3577
Tssr103009 11 75630815 to 75630830 15 + TSS region transcription start site region 103009
Tssr103010 11 75630832 to 75630851 19 + TSS region transcription start site region 103010
Tssr103011 11 75630948 to 75630959 11 + TSS region transcription start site region 103011
Tssr103012 11 75630974 to 75631076 102 + TSS region transcription start site region 103012
Inpp5k 11 75630988 to 75648871 17883 + protein coding gene inositol polyphosphate 5-phosphatase K
Tssr103013 11 75631086 to 75631100 14 + TSS region transcription start site region 103013
Tssr103014 11 75636759 to 75636814 55 + TSS region transcription start site region 103014
Tssr103015 11 75636817 to 75636848 31 + TSS region transcription start site region 103015
Tssr103016 11 75642557 to 75642590 33 + TSS region transcription start site region 103016
Tssr3578 11 75650488 to 75650493 5 + TSS region transcription start site region 3578
Tssr103017 11 75650501 to 75650544 43 + TSS region transcription start site region 103017
Myo1c 11 75650504 to 75673910 23406 + protein coding gene myosin IC
Tssr103018 11 75650553 to 75650570 17 + TSS region transcription start site region 103018
Tssr103019 11 75650612 to 75650624 12 + TSS region transcription start site region 103019
Tssr103020 11 75651199 to 75651210 11 + TSS region transcription start site region 103020
Tssr103021 11 75651221 to 75651246 25 + TSS region transcription start site region 103021
Cpgi3271 11 75651265 to 75652263 998 CpG island CpG island 3271
Tssr103022 11 75651504 to 75651537 33 + TSS region transcription start site region 103022
Tssr103023 11 75651541 to 75651613 72 + TSS region transcription start site region 103023
Tssr103024 11 75651619 to 75651637 18 + TSS region transcription start site region 103024
Tssr103025 11 75652201 to 75652242 41 + TSS region transcription start site region 103025
Cpgi3272 11 75653737 to 75654716 979 CpG island CpG island 3272
Cpgi3273 11 75655473 to 75656587 1114 CpG island CpG island 3273
Tssr103026 11 75655751 to 75655775 24 + TSS region transcription start site region 103026
Tssr103027 11 75655845 to 75655856 11 + TSS region transcription start site region 103027
Tssr103028 11 75655911 to 75655918 7 + TSS region transcription start site region 103028
Tssr103029 11 75655928 to 75655937 9 + TSS region transcription start site region 103029
Tssr103030 11 75655979 to 75656000 21 + TSS region transcription start site region 103030
Tssr103031 11 75656003 to 75656037 34 + TSS region transcription start site region 103031
Tssr103032 11 75656103 to 75656177 74 + TSS region transcription start site region 103032
Tssr103033 11 75661614 to 75661623 9 + TSS region transcription start site region 103033
Cpgi3274 11 75678827 to 75680010 1183 CpG island CpG island 3274
Crk 11 75679259 to 75706908 27649 + protein coding gene v-crk avian sarcoma virus CT10 oncogene homolog
Tssr103034 11 75679269 to 75679327 58 + TSS region transcription start site region 103034
Tssr103035 11 75679628 to 75679637 9 + TSS region transcription start site region 103035
Tssr103036 11 75692602 to 75692620 18 + TSS region transcription start site region 103036
D11Bhm22 11 75729816 to 75729996 180 DNA segment DNA segment, Chr 11, Boehm 22
Cpgi3275 11 75732538 to 75733787 1249 CpG island CpG island 3275
Ywhae 11 75732887 to 75765841 32954 + protein coding gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
Tssr103037 11 75732908 to 75732975 67 + TSS region transcription start site region 103037
Tssr103038 11 75733037 to 75733043 6 + TSS region transcription start site region 103038
Tssr103039 11 75734570 to 75734575 5 + TSS region transcription start site region 103039