Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:75251063-75431108

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rtn4rl1 11 75193993 to 75267769 73776 + protein coding gene reticulon 4 receptor-like 1
Gm35117 11 75254064 to 75274183 20119 - lncRNA gene predicted gene, 35117
Tssr102936 11 75272079 to 75272080 1 + TSS region transcription start site region 102936
Cpgi3259 11 75281531 to 75281755 224 CpG island CpG island 3259
Tssr109165 11 75297869 to 75297880 11 - TSS region transcription start site region 109165
Rpa1 11 75300259 to 75348383 48124 - protein coding gene replication protein A1
Gm47300 11 75318488 to 75318608 120 - miRNA gene predicted gene, 47300
Tssr109166 11 75318893 to 75318918 25 - TSS region transcription start site region 109166
D11Bhm21 11 75322393 to 75322502 109 DNA segment DNA segment, Chr 11, Boehm 21
Tssr109167 11 75336789 to 75336810 21 - TSS region transcription start site region 109167
Tssr109168 11 75341063 to 75341108 45 - TSS region transcription start site region 109168
Tssr109169 11 75344320 to 75344324 4 - TSS region transcription start site region 109169
Cpgi3260 11 75348015 to 75348816 801 CpG island CpG island 3260
Tssr109170 11 75348261 to 75348323 62 - TSS region transcription start site region 109170
Tssr109171 11 75348335 to 75348342 7 - TSS region transcription start site region 109171
Smyd4 11 75348433 to 75405705 57272 + protein coding gene SET and MYND domain containing 4
Tssr102937 11 75348493 to 75348560 67 + TSS region transcription start site region 102937
Serpinf1 11 75410029 to 75422623 12594 - protein coding gene serine (or cysteine) peptidase inhibitor, clade F, member 1
Tssr109172 11 75414965 to 75414978 13 - TSS region transcription start site region 109172
Tssr109173 11 75415045 to 75415056 11 - TSS region transcription start site region 109173
Tssr109174 11 75415060 to 75415077 17 - TSS region transcription start site region 109174
Tssr109175 11 75415106 to 75415118 12 - TSS region transcription start site region 109175
Tssr109176 11 75415127 to 75415141 14 - TSS region transcription start site region 109176
Tssr109177 11 75415144 to 75415151 7 - TSS region transcription start site region 109177
Tssr109178 11 75415625 to 75415648 23 - TSS region transcription start site region 109178
Tssr102938 11 75415639 to 75415657 18 + TSS region transcription start site region 102938
Tssr109179 11 75415685 to 75415701 16 - TSS region transcription start site region 109179
Tssr109180 11 75415719 to 75415733 14 - TSS region transcription start site region 109180
Tssr109181 11 75416254 to 75416260 6 - TSS region transcription start site region 109181
Tssr109182 11 75416279 to 75416290 11 - TSS region transcription start site region 109182
Tssr109183 11 75416335 to 75416353 18 - TSS region transcription start site region 109183
Tssr109184 11 75416377 to 75416392 15 - TSS region transcription start site region 109184
Tssr109185 11 75422524 to 75422561 37 - TSS region transcription start site region 109185
Tssr109186 11 75422587 to 75422609 22 - TSS region transcription start site region 109186
Gm35337 11 75422663 to 75426377 3714 + lncRNA gene predicted gene, 35337
Gm12336 11 75422731 to 75423340 609 - lincRNA gene predicted gene 12336
Gm12337 11 75427753 to 75428152 399 + pseudogene predicted gene 12337