Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:75181531-75381755

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dph1 11 75177643 to 75190483 12840 - protein coding gene diphthamide biosynthesis 1
Cpgi3256 11 75190113 to 75190737 624 CpG island CpG island 3256
Tssr109163 11 75190458 to 75190488 30 - TSS region transcription start site region 109163
Cpgi3257 11 75193105 to 75195625 2520 CpG island CpG island 3257
Tssr102931 11 75193797 to 75193864 67 + TSS region transcription start site region 102931
Tssr102932 11 75193868 to 75193877 9 + TSS region transcription start site region 102932
Tssr102933 11 75193991 to 75193998 7 + TSS region transcription start site region 102933
Rtn4rl1 11 75193993 to 75267769 73776 + protein coding gene reticulon 4 receptor-like 1
Tssr109164 11 75195309 to 75195319 10 - TSS region transcription start site region 109164
Tssr102934 11 75206827 to 75206832 5 + TSS region transcription start site region 102934
Cpgi3258 11 75213407 to 75214067 660 CpG island CpG island 3258
Tssr102935 11 75214103 to 75214127 24 + TSS region transcription start site region 102935
Gm35169 11 75243273 to 75246360 3087 - lncRNA gene predicted gene, 35169
Gm35117 11 75254064 to 75274183 20119 - lncRNA gene predicted gene, 35117
Tssr102936 11 75272079 to 75272080 1 + TSS region transcription start site region 102936
Cpgi3259 11 75281531 to 75281755 224 CpG island CpG island 3259
Tssr109165 11 75297869 to 75297880 11 - TSS region transcription start site region 109165
Rpa1 11 75300259 to 75348383 48124 - protein coding gene replication protein A1
Gm47300 11 75318488 to 75318608 120 - miRNA gene predicted gene, 47300
Tssr109166 11 75318893 to 75318918 25 - TSS region transcription start site region 109166
D11Bhm21 11 75322393 to 75322502 109 DNA segment DNA segment, Chr 11, Boehm 21
Tssr109167 11 75336789 to 75336810 21 - TSS region transcription start site region 109167
Tssr109168 11 75341063 to 75341108 45 - TSS region transcription start site region 109168
Tssr109169 11 75344320 to 75344324 4 - TSS region transcription start site region 109169
Cpgi3260 11 75348015 to 75348816 801 CpG island CpG island 3260
Tssr109170 11 75348261 to 75348323 62 - TSS region transcription start site region 109170
Tssr109171 11 75348335 to 75348342 7 - TSS region transcription start site region 109171
Smyd4 11 75348433 to 75405705 57272 + protein coding gene SET and MYND domain containing 4
Tssr102937 11 75348493 to 75348560 67 + TSS region transcription start site region 102937