Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:74698081-75098106

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae45 11 58599729 to 74863932 16264203 QTL experimental allergic encephalomyelitis susceptibility 45
Pafah1b1 11 74673949 to 74724384 50435 - protein coding gene platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
Tssr109133 11 74699692 to 74699696 4 - TSS region transcription start site region 109133
Tssr109134 11 74705617 to 74705630 13 - TSS region transcription start site region 109134
D11Mit352 11 74707235 to 74707475 240 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 352
Cpgi3244 11 74723231 to 74724837 1606 CpG island CpG island 3244
Tssr109135 11 74723829 to 74723860 31 - TSS region transcription start site region 109135
Tssr109136 11 74724029 to 74724091 62 - TSS region transcription start site region 109136
Tssr109137 11 74724132 to 74724160 28 - TSS region transcription start site region 109137
Tssr109138 11 74724305 to 74724329 24 - TSS region transcription start site region 109138
Tssr109139 11 74724332 to 74724393 61 - TSS region transcription start site region 109139
Tssr109140 11 74724687 to 74724702 15 - TSS region transcription start site region 109140
Gm24211 11 74728403 to 74728509 106 + snRNA gene predicted gene, 24211
Gm40198 11 74730779 to 74738018 7239 - lncRNA gene predicted gene, 40198
Gm16032 11 74732203 to 74732370 167 - pseudogene predicted gene 16032
Tssr109141 11 74756725 to 74756730 5 - TSS region transcription start site region 109141
D11Bhm4 11 74765235 to 74765473 238 DNA segment DNA segment, Chr 11, Boehm 4
Cpgi3245 11 74770645 to 74771493 848 CpG island CpG island 3245
Tssr109142 11 74770687 to 74770697 10 - TSS region transcription start site region 109142
Tssr109143 11 74770712 to 74770743 31 - TSS region transcription start site region 109143
Tssr102908 11 74770822 to 74770876 54 + TSS region transcription start site region 102908
Mettl16 11 74770836 to 74826855 56019 + protein coding gene methyltransferase like 16
Tssr102909 11 74770881 to 74770907 26 + TSS region transcription start site region 102909
Tssr102910 11 74770908 to 74770920 12 + TSS region transcription start site region 102910
Cpgi3246 11 74829699 to 74832484 2785 CpG island CpG island 3246
Tssr109144 11 74829891 to 74829902 11 - TSS region transcription start site region 109144
Tssr109145 11 74830659 to 74830689 30 - TSS region transcription start site region 109145
Tssr102911 11 74830888 to 74830903 15 + TSS region transcription start site region 102911
Tssr102912 11 74830907 to 74830920 13 + TSS region transcription start site region 102912
Mnt 11 74830920 to 74845725 14805 + protein coding gene max binding protein
Tssr102913 11 74830935 to 74831005 70 + TSS region transcription start site region 102913
Tssr102914 11 74831214 to 74831278 64 + TSS region transcription start site region 102914
Tssr109146 11 74831794 to 74831804 10 - TSS region transcription start site region 109146
Tssr109147 11 74831992 to 74832010 18 - TSS region transcription start site region 109147
Tssr109148 11 74832182 to 74832205 23 - TSS region transcription start site region 109148
Tssr109149 11 74832219 to 74832235 16 - TSS region transcription start site region 109149
Cpgi3247 11 74832737 to 74833137 400 CpG island CpG island 3247
Cpgi3248 11 74837463 to 74838836 1373 CpG island CpG island 3248
Tssr102915 11 74839236 to 74839247 11 + TSS region transcription start site region 102915
Sgsm2 11 74849261 to 74897060 47799 - protein coding gene small G protein signaling modulator 2
D11Bhm8 11 74851030 to 74851103 73 DNA segment DNA segment, Chr 11, Boehm 8
Tssr109150 11 74851186 to 74851202 16 - TSS region transcription start site region 109150
Tssr109151 11 74851856 to 74851863 7 - TSS region transcription start site region 109151
Etohcta9 11 74863834 to 74863932 98 QTL ethanol conditioned taste aversion 9
D11Nds1 11 74863834 to 74863932 98 DNA segment DNA segment, Chr 11, Nuffield Department of Surgery 1
Mir6926 11 74868127 to 74868194 67 - miRNA gene microRNA 6926
Tssr109152 11 74869255 to 74869296 41 - TSS region transcription start site region 109152
D11Bhm6 11 74875766 to 74875871 105 DNA segment DNA segment, Chr 11, Boehm 6
D11Bhm10 11 74881599 to 74881740 141 DNA segment DNA segment, Chr 11, Boehm 10
Cpgi3249 11 74896309 to 74898503 2194 CpG island CpG island 3249
Tssr109153 11 74897052 to 74897094 42 - TSS region transcription start site region 109153
Tsr1 11 74898080 to 74909340 11260 + protein coding gene TSR1 20S rRNA accumulation
Tssr102916 11 74898081 to 74898106 25 + TSS region transcription start site region 102916
Snord91a 11 74905446 to 74905505 59 + snoRNA gene small nucleolar RNA, C/D box 91A
Gm22771 11 74906109 to 74906199 90 + snoRNA gene predicted gene, 22771
Srr 11 74906359 to 74925948 19589 - protein coding gene serine racemase
Tssr109154 11 74908056 to 74908070 14 - TSS region transcription start site region 109154
D11Jcs5 11 74913887 to 74914060 173 DNA segment DNA segment, Chr 11, John C. Schimenti 5
D11Bhm11 11 74916404 to 74916485 81 DNA segment DNA segment, Chr 11, Boehm 11
Cpgi3250 11 74925403 to 74926444 1041 CpG island CpG island 3250
Tssr109155 11 74925658 to 74925716 58 - TSS region transcription start site region 109155
Tssr102917 11 74925816 to 74925833 17 + TSS region transcription start site region 102917
Tssr102918 11 74925837 to 74925867 30 + TSS region transcription start site region 102918
Smg6 11 74925872 to 75164448 238576 + protein coding gene Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
Tssr102919 11 74925878 to 74925909 31 + TSS region transcription start site region 102919
Tssr109156 11 74925925 to 74925985 60 - TSS region transcription start site region 109156
Tssr102920 11 74926081 to 74926133 52 + TSS region transcription start site region 102920
Tssr102921 11 74926864 to 74926887 23 + TSS region transcription start site region 102921
Tssr109157 11 74927519 to 74927528 9 - TSS region transcription start site region 109157
Tssr102922 11 74927692 to 74927697 5 + TSS region transcription start site region 102922
Tssr102923 11 74927712 to 74927722 10 + TSS region transcription start site region 102923
Tssr102924 11 74927726 to 74927731 5 + TSS region transcription start site region 102924
Gm22733 11 74936061 to 74936151 90 - snRNA gene predicted gene, 22733
D11Bhm12 11 74970632 to 74970737 105 DNA segment DNA segment, Chr 11, Boehm 12
Tssr102925 11 74981766 to 74981802 36 + TSS region transcription start site region 102925
D11Bhm13 11 74986755 to 74986864 109 DNA segment DNA segment, Chr 11, Boehm 13
Gm28180 11 74992773 to 74993494 721 - antisense lncRNA gene predicted gene 28180
D11Ertd72e 11 74993654 to 74993867 213 DNA segment DNA segment, Chr 11, ERATO Doi 72, expressed
D11Bhm14 11 75017315 to 75017398 83 DNA segment DNA segment, Chr 11, Boehm 14
Gm12333 11 75036476 to 75039348 2872 - antisense lncRNA gene predicted gene 12333
Tssr102926 11 75038549 to 75038568 19 + TSS region transcription start site region 102926
D11Bhm16 11 75060148 to 75060241 93 DNA segment DNA segment, Chr 11, Boehm 16
Tssr102927 11 75063115 to 75063116 1 + TSS region transcription start site region 102927
Gm12335 11 75066436 to 75066762 326 - pseudogene predicted gene 12335
Rps12-ps19 11 75070863 to 75071228 365 - pseudogene ribosomal protein S12, pseudogene 19
Tssr109158 11 75071297 to 75071300 3 - TSS region transcription start site region 109158
D11Jcs6 11 75087017 to 75087187 170 DNA segment DNA segment, Chr 11, John C. Schimenti 6