Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:73661249-74721446

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr102898 11 73663002 to 73663005 3 + TSS region transcription start site region 102898
Olfr387-ps1 11 73664607 to 73665540 933 + polymorphic pseudogene olfactory receptor 387, pseudogene 1
Zfp735 11 73688778 to 73713798 25020 + protein coding gene zinc finger protein 735
Gm44665 11 73718203 to 73718761 558 + pseudogene predicted gene 44665
Olfr388-ps1 11 73724085 to 73725022 937 - polymorphic pseudogene olfactory receptor 388, pseudogene 1
Gm22381 11 73756037 to 73756143 106 + snRNA gene predicted gene, 22381
Gm12328 11 73771924 to 73772120 196 - pseudogene predicted gene 12328
Olfr389 11 73776387 to 73780589 4202 - protein coding gene olfactory receptor 389
Olfr390 11 73786940 to 73787875 935 + protein coding gene olfactory receptor 390
Olfr391-ps 11 73798753 to 73802984 4231 - protein coding gene olfactory receptor 391, pseudogene
Olfr392 11 73814142 to 73816877 2735 - protein coding gene olfactory receptor 392
Gm12329 11 73837722 to 73839541 1819 - pseudogene predicted gene 12329
Opfaq3 11 73846715 to 82178599 8331884 QTL open field activity QTL 3
Olfr393 11 73847185 to 73848123 938 - protein coding gene olfactory receptor 393
Gm44638 11 73869586 to 73869660 74 - pseudogene predicted gene 44638
Olfr394 11 73887438 to 73888370 932 - protein coding gene olfactory receptor 394
Gm44575 11 73895728 to 73895768 40 - pseudogene predicted gene 44575
Olfr395 11 73906552 to 73907490 938 - protein coding gene olfactory receptor 395
Olfr396-ps1 11 73928007 to 73928942 935 + polymorphic pseudogene olfactory receptor 396, pseudogene 1
Olfr23 11 73936677 to 73942658 5981 + protein coding gene olfactory receptor 23
Olfr22-ps1 11 73954692 to 73955625 933 + polymorphic pseudogene olfactory receptor 22, pseudogene 1
Olfr397 11 73964610 to 73965557 947 + protein coding gene olfactory receptor 397
Olfr398 11 73983662 to 73984606 944 - protein coding gene olfactory receptor 398
Olfr139 11 74044325 to 74045272 947 - protein coding gene olfactory receptor 139
Olfr399 11 74053776 to 74054778 1002 - protein coding gene olfactory receptor 399
Zfp616 11 74069955 to 74087292 17337 + protein coding gene zinc finger protein 616
Gm12331 11 74077519 to 74078140 621 - pseudogene predicted gene 12331
Olfr400-ps1 11 74104841 to 74110791 5950 + pseudogene olfactory receptor 400, pseudogene 1
Olfr401 11 74121291 to 74122238 947 + protein coding gene olfactory receptor 401
n-TKctt5 11 74137315 to 74137387 72 - tRNA gene nuclear encoded tRNA lysine 5 (anticodon CTT)
Olfr402 11 74155156 to 74156103 947 + protein coding gene olfactory receptor 402
Olfr403 11 74186249 to 74196446 10197 + protein coding gene olfactory receptor 403
Olfr43 11 74206198 to 74207289 1091 - protein coding gene olfactory receptor 43
Olfr404-ps1 11 74239566 to 74240504 938 + polymorphic pseudogene olfactory receptor 404, pseudogene 1
Olfr405-ps1 11 74255699 to 74256631 932 - pseudogene olfactory receptor 405, pseudogene 1
Olfr406 11 74269391 to 74270362 971 + protein coding gene olfactory receptor 406
Olfr407-ps1 11 74280715 to 74281732 1017 - pseudogene olfactory receptor 407, pseudogene 1
Olfr59 11 74283752 to 74289646 5894 + protein coding gene olfactory receptor 59
Olfr408-ps1 11 74298136 to 74299073 937 - pseudogene olfactory receptor 408, pseudogene 1
Olfr409-ps1 11 74317027 to 74317997 970 + polymorphic pseudogene olfactory receptor 409, pseudogene 1
n-R5s71 11 74319792 to 74319910 118 + rRNA gene nuclear encoded rRNA 5S 71
Gm12332 11 74322546 to 74323467 921 + pseudogene predicted gene 12332
Olfr410 11 74334282 to 74335229 947 - protein coding gene olfactory receptor 410
Olfr411 11 74346624 to 74347672 1048 - protein coding gene olfactory receptor 411
Olfr412 11 74364671 to 74365609 938 + protein coding gene olfactory receptor 412
D11Bhm1 11 74370648 to 74370743 95 DNA segment DNA segment, Chr 11, Boehm 1
D11Bhm3 11 74380422 to 74380488 66 DNA segment DNA segment, Chr 11, Boehm 3
Rap1gap2 11 74383483 to 74610910 227427 - protein coding gene RAP1 GTPase activating protein 2
D11Bhm2 11 74422845 to 74422936 91 DNA segment DNA segment, Chr 11, Boehm 2
Tssr109119 11 74457258 to 74457296 38 - TSS region transcription start site region 109119
Cpgi3238 11 74522025 to 74523772 1747 CpG island CpG island 3238
Tssr109120 11 74522574 to 74522593 19 - TSS region transcription start site region 109120
Tssr109121 11 74522598 to 74522630 32 - TSS region transcription start site region 109121
Tssr109122 11 74522738 to 74522808 70 - TSS region transcription start site region 109122
Tssr109123 11 74547100 to 74547112 12 - TSS region transcription start site region 109123
Tssr109124 11 74572681 to 74572690 9 - TSS region transcription start site region 109124
Tssr109125 11 74572692 to 74572728 36 - TSS region transcription start site region 109125
Tssr109126 11 74572735 to 74572750 15 - TSS region transcription start site region 109126
Cpgi3239 11 74589381 to 74590932 1551 CpG island CpG island 3239
Tssr109127 11 74590015 to 74590033 18 - TSS region transcription start site region 109127
Tssr109128 11 74590065 to 74590149 84 - TSS region transcription start site region 109128
Tssr109129 11 74590187 to 74590215 28 - TSS region transcription start site region 109129
Cpgi3240 11 74610429 to 74611204 775 CpG island CpG island 3240
Gm22993 11 74618260 to 74618513 253 - unclassified non-coding RNA gene predicted gene, 22993
Cpgi3241 11 74619137 to 74620163 1026 CpG island CpG island 3241
Tssr102899 11 74619594 to 74619643 49 + TSS region transcription start site region 102899
Ccdc92b 11 74619605 to 74641516 21911 + protein coding gene coiled-coil domain containing 92B
Tssr102900 11 74619676 to 74619714 38 + TSS region transcription start site region 102900
D11Bhm5 11 74622105 to 74622207 102 DNA segment DNA segment, Chr 11, Boehm 5
Cpgi3242 11 74637416 to 74639071 1655 CpG island CpG island 3242
Tssr109130 11 74638084 to 74638099 15 - TSS region transcription start site region 109130
Cpgi3243 11 74649120 to 74650619 1499 CpG island CpG island 3243
Tssr102901 11 74649462 to 74649520 58 + TSS region transcription start site region 102901
Cluh 11 74649495 to 74670847 21352 + protein coding gene clustered mitochondria (cluA/CLU1) homolog
Tssr102902 11 74649526 to 74649550 24 + TSS region transcription start site region 102902
Tssr3574 11 74649956 to 74649966 10 + TSS region transcription start site region 3574
Tssr102903 11 74649973 to 74649984 11 + TSS region transcription start site region 102903
Tssr102904 11 74650567 to 74650579 12 + TSS region transcription start site region 102904
Tssr102905 11 74653143 to 74653179 36 + TSS region transcription start site region 102905
Tssr102906 11 74662003 to 74662023 20 + TSS region transcription start site region 102906
Tssr102907 11 74665350 to 74665365 15 + TSS region transcription start site region 102907
Pafah1b1 11 74673949 to 74724384 50435 - protein coding gene platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
Tssr109131 11 74674370 to 74674381 11 - TSS region transcription start site region 109131
Tssr109132 11 74676613 to 74676616 3 - TSS region transcription start site region 109132
D11Bhm9 11 74678497 to 74678618 121 DNA segment DNA segment, Chr 11, Boehm 9
D11Bhm7 11 74680881 to 74680968 87 DNA segment DNA segment, Chr 11, Boehm 7
Tssr109133 11 74699692 to 74699696 4 - TSS region transcription start site region 109133
Tssr109134 11 74705617 to 74705630 13 - TSS region transcription start site region 109134
D11Mit352 11 74707235 to 74707475 240 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 352