Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:73344692-74565625

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49340 11 73329741 to 73355913 26172 + protein coding gene predicted gene, 49340
Spata22 11 73329741 to 73346044 16303 + protein coding gene spermatogenesis associated 22
Olfr20 11 73350859 to 73354699 3840 + protein coding gene olfactory receptor 20
Olfr376 11 73371246 to 73375704 4458 + protein coding gene olfactory receptor 376
Olfr377-ps1 11 73388084 to 73389024 940 - polymorphic pseudogene olfactory receptor 377, pseudogene 1
D11Mit194 11 73389313 to 73389442 129 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 194
Tssr102896 11 73389821 to 73389831 10 + TSS region transcription start site region 102896
Gm17811 11 73389934 to 73390320 386 + pseudogene predicted gene, 17811
Tssr102897 11 73390099 to 73390101 2 + TSS region transcription start site region 102897
Olfr1 11 73395076 to 73399495 4419 - protein coding gene olfactory receptor 1
Olfr75-ps1 11 73405450 to 73409858 4408 - pseudogene olfactory receptor 75, pseudogene 1
Gm44922 11 73413319 to 73413408 89 - pseudogene predicted gene 44922
Olfr378 11 73425037 to 73428477 3440 - protein coding gene olfactory receptor 378
Olfr379-ps1 11 73433291 to 73434224 933 - polymorphic pseudogene olfactory receptor 379, pseudogene 1
Olfr380 11 73453275 to 73454210 935 - protein coding gene olfactory receptor 380
Gm44923 11 73483774 to 73483858 84 - pseudogene predicted gene 44923
Olfr381 11 73485887 to 73486822 935 - protein coding gene olfactory receptor 381
Olfr382 11 73516259 to 73517197 938 - protein coding gene olfactory receptor 382
Olfr383-ps1 11 73540452 to 73541353 901 - pseudogene olfactory receptor 383, pseudogene 1
Olfr385 11 73588798 to 73589736 938 - protein coding gene olfactory receptor 385
Olfr384 11 73602582 to 73603520 938 + protein coding gene olfactory receptor 384
Gm12327 11 73641786 to 73645155 3369 + pseudogene predicted gene 12327
Tssr102898 11 73663002 to 73663005 3 + TSS region transcription start site region 102898
Olfr387-ps1 11 73664607 to 73665540 933 + polymorphic pseudogene olfactory receptor 387, pseudogene 1
Zfp735 11 73688778 to 73713798 25020 + protein coding gene zinc finger protein 735
Gm44665 11 73718203 to 73718761 558 + pseudogene predicted gene 44665
Olfr388-ps1 11 73724085 to 73725022 937 - polymorphic pseudogene olfactory receptor 388, pseudogene 1
Gm22381 11 73756037 to 73756143 106 + snRNA gene predicted gene, 22381
Gm12328 11 73771924 to 73772120 196 - pseudogene predicted gene 12328
Olfr389 11 73776387 to 73780589 4202 - protein coding gene olfactory receptor 389
Olfr390 11 73786940 to 73787875 935 + protein coding gene olfactory receptor 390
Olfr391-ps 11 73798753 to 73802984 4231 - protein coding gene olfactory receptor 391, pseudogene
Olfr392 11 73814142 to 73816877 2735 - protein coding gene olfactory receptor 392
Gm12329 11 73837722 to 73839541 1819 - pseudogene predicted gene 12329
Opfaq3 11 73846715 to 82178599 8331884 QTL open field activity QTL 3
Olfr393 11 73847185 to 73848123 938 - protein coding gene olfactory receptor 393
Gm44638 11 73869586 to 73869660 74 - pseudogene predicted gene 44638
Olfr394 11 73887438 to 73888370 932 - protein coding gene olfactory receptor 394
Gm44575 11 73895728 to 73895768 40 - pseudogene predicted gene 44575
Olfr395 11 73906552 to 73907490 938 - protein coding gene olfactory receptor 395
Olfr396-ps1 11 73928007 to 73928942 935 + polymorphic pseudogene olfactory receptor 396, pseudogene 1
Olfr23 11 73936677 to 73942658 5981 + protein coding gene olfactory receptor 23
Olfr22-ps1 11 73954692 to 73955625 933 + polymorphic pseudogene olfactory receptor 22, pseudogene 1
Olfr397 11 73964610 to 73965557 947 + protein coding gene olfactory receptor 397
Olfr398 11 73983662 to 73984606 944 - protein coding gene olfactory receptor 398
Olfr139 11 74044325 to 74045272 947 - protein coding gene olfactory receptor 139
Olfr399 11 74053776 to 74054778 1002 - protein coding gene olfactory receptor 399
Zfp616 11 74069955 to 74087292 17337 + protein coding gene zinc finger protein 616
Gm12331 11 74077519 to 74078140 621 - pseudogene predicted gene 12331
Olfr400-ps1 11 74104841 to 74110791 5950 + pseudogene olfactory receptor 400, pseudogene 1
Olfr401 11 74121291 to 74122238 947 + protein coding gene olfactory receptor 401
n-TKctt5 11 74137315 to 74137387 72 - tRNA gene nuclear encoded tRNA lysine 5 (anticodon CTT)
Olfr402 11 74155156 to 74156103 947 + protein coding gene olfactory receptor 402
Olfr403 11 74186249 to 74196446 10197 + protein coding gene olfactory receptor 403
Olfr43 11 74206198 to 74207289 1091 - protein coding gene olfactory receptor 43
Olfr404-ps1 11 74239566 to 74240504 938 + polymorphic pseudogene olfactory receptor 404, pseudogene 1
Olfr405-ps1 11 74255699 to 74256631 932 - pseudogene olfactory receptor 405, pseudogene 1
Olfr406 11 74269391 to 74270362 971 + protein coding gene olfactory receptor 406
Olfr407-ps1 11 74280715 to 74281732 1017 - pseudogene olfactory receptor 407, pseudogene 1
Olfr59 11 74283752 to 74289646 5894 + protein coding gene olfactory receptor 59
Olfr408-ps1 11 74298136 to 74299073 937 - pseudogene olfactory receptor 408, pseudogene 1
Olfr409-ps1 11 74317027 to 74317997 970 + polymorphic pseudogene olfactory receptor 409, pseudogene 1
n-R5s71 11 74319792 to 74319910 118 + rRNA gene nuclear encoded rRNA 5S 71
Gm12332 11 74322546 to 74323467 921 + pseudogene predicted gene 12332
Olfr410 11 74334282 to 74335229 947 - protein coding gene olfactory receptor 410
Olfr411 11 74346624 to 74347672 1048 - protein coding gene olfactory receptor 411
Olfr412 11 74364671 to 74365609 938 + protein coding gene olfactory receptor 412
D11Bhm1 11 74370648 to 74370743 95 DNA segment DNA segment, Chr 11, Boehm 1
D11Bhm3 11 74380422 to 74380488 66 DNA segment DNA segment, Chr 11, Boehm 3
Rap1gap2 11 74383483 to 74610910 227427 - protein coding gene RAP1 GTPase activating protein 2
D11Bhm2 11 74422845 to 74422936 91 DNA segment DNA segment, Chr 11, Boehm 2
Tssr109119 11 74457258 to 74457296 38 - TSS region transcription start site region 109119
Cpgi3238 11 74522025 to 74523772 1747 CpG island CpG island 3238
Tssr109120 11 74522574 to 74522593 19 - TSS region transcription start site region 109120
Tssr109121 11 74522598 to 74522630 32 - TSS region transcription start site region 109121
Tssr109122 11 74522738 to 74522808 70 - TSS region transcription start site region 109122
Tssr109123 11 74547100 to 74547112 12 - TSS region transcription start site region 109123