MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:73140421-73192685

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Itgae	11	73090583 to 73147446	56863	+	protein coding gene	integrin alpha E, epithelial-associated
Gm35001	11	73158198 to 73160185	1987	-	lncRNA gene	predicted gene, 35001
Cpgi3231	11	73160123 to 73160909	786		CpG island	CpG island 3231
Tssr102884	11	73160308 to 73160341	33	+	TSS region	transcription start site region 102884
Tssr102885	11	73160382 to 73160395	13	+	TSS region	transcription start site region 102885
Tssr102886	11	73160403 to 73160420	17	+	TSS region	transcription start site region 102886
P2rx5	11	73160421 to 73172685	12264	+	protein coding gene	purinergic receptor P2X, ligand-gated ion channel, 5
Emc6	11	73175519 to 73177037	1518	-	protein coding gene	ER membrane protein complex subunit 6
Cpgi3232	11	73176391 to 73177880	1489		CpG island	CpG island 3232
Tssr102887	11	73176478 to 73176501	23	+	TSS region	transcription start site region 102887
Tssr109110	11	73176542 to 73176593	51	-	TSS region	transcription start site region 109110
Tssr109111	11	73176984 to 73176999	15	-	TSS region	transcription start site region 109111
Tssr109112	11	73177011 to 73177047	36	-	TSS region	transcription start site region 109112
Tax1bp3	11	73177083 to 73182046	4963	+	protein coding gene	Tax1 (human T cell leukemia virus type I) binding protein 3
Tssr102888	11	73177200 to 73177235	35	+	TSS region	transcription start site region 102888
Tssr102889	11	73177236 to 73177261	25	+	TSS region	transcription start site region 102889
Ctns	11	73183596 to 73199042	15446	-	protein coding gene	cystinosis, nephropathic