Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 11:72398153-72650509

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57 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ari2 11 69100000 to 72600000 3500000 QTL antibody response to influenza 2, day 10, IgG3
Ars1 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 1, day 7, IgG1
Ars10 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c
Ars11 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 11, 4 days post-rechallenge, IgM
Ars2 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 2, day 7, IgG2a+IgG2c
Ars3 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 3, day 7, IgG2b
Ars4 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 4, day 7, IgG3
Ars5 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 5, day 7, IgM
Ars6 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 6, day 15, IgM
Ars7 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 7, day 29, IgG1
Ars8 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 8, day 29, IgG2a+IgG2c
Ars9 11 69100000 to 72600000 3500000 QTL antibody response to SARS-CoV 9, day 29, IgM
Smtnl2 11 72389164 to 72411713 22549 - protein coding gene smoothelin-like 2
Tssr109084 11 72410307 to 72410320 13 - TSS region transcription start site region 109084
Cpgi3220 11 72410608 to 72412016 1408 CpG island CpG island 3220
Tssr109085 11 72411695 to 72411718 23 - TSS region transcription start site region 109085
Tssr109086 11 72411721 to 72411733 12 - TSS region transcription start site region 109086
Tssr102839 11 72435234 to 72435302 68 + TSS region transcription start site region 102839
Tssr102840 11 72435511 to 72435529 18 + TSS region transcription start site region 102840
Ggt6 11 72435526 to 72438400 2874 + protein coding gene gamma-glutamyltransferase 6
Tssr102841 11 72435536 to 72435558 22 + TSS region transcription start site region 102841
Tssr102842 11 72435565 to 72435578 13 + TSS region transcription start site region 102842
Tssr102843 11 72438651 to 72438689 38 + TSS region transcription start site region 102843
Cpgi3221 11 72440976 to 72441888 912 CpG island CpG island 3221
Tssr109087 11 72441219 to 72441276 57 - TSS region transcription start site region 109087
Tssr102844 11 72441341 to 72441386 45 + TSS region transcription start site region 102844
Mybbp1a 11 72441355 to 72451768 10413 + protein coding gene MYB binding protein (P160) 1a
Tssr102845 11 72450703 to 72450707 4 + TSS region transcription start site region 102845
Tssr102846 11 72451158 to 72451178 20 + TSS region transcription start site region 102846
Spns2 11 72451638 to 72489904 38266 - protein coding gene spinster homolog 2
Tssr109088 11 72454439 to 72454474 35 - TSS region transcription start site region 109088
Gm40194 11 72457382 to 72461817 4435 + lncRNA gene predicted gene, 40194
Tssr102847 11 72458155 to 72458171 16 + TSS region transcription start site region 102847
Tssr109089 11 72475008 to 72475032 24 - TSS region transcription start site region 109089
Tssr109090 11 72475042 to 72475070 28 - TSS region transcription start site region 109090
Cpgi3222 11 72488719 to 72490596 1877 CpG island CpG island 3222
Tssr109091 11 72489953 to 72489979 26 - TSS region transcription start site region 109091
Spns3 11 72498153 to 72550509 52356 - protein coding gene spinster homolog 3
Tssr109092 11 72502409 to 72502427 18 - TSS region transcription start site region 109092
Tssr109093 11 72502436 to 72502451 15 - TSS region transcription start site region 109093
Tssr3572 11 72540551 to 72540558 7 - TSS region transcription start site region 3572
Tssr109094 11 72550195 to 72550206 11 - TSS region transcription start site region 109094
Tssr109095 11 72550230 to 72550244 14 - TSS region transcription start site region 109095
Tssr109096 11 72550255 to 72550264 9 - TSS region transcription start site region 109096
Gm51906 11 72563817 to 72607163 43346 - lncRNA gene predicted gene, 51906
Cpgi3223 11 72570576 to 72570850 274 CpG island CpG island 3223
Gm12712 11 72572530 to 72573330 800 - pseudogene predicted gene 12712
Cpgi3224 11 72606809 to 72608673 1864 CpG island CpG island 3224
Tssr109097 11 72607075 to 72607089 14 - TSS region transcription start site region 109097
Tssr102848 11 72607221 to 72607307 86 + TSS region transcription start site region 102848
Ube2g1 11 72607283 to 72686481 79198 + protein coding gene ubiquitin-conjugating enzyme E2G 1
Tssr102849 11 72607313 to 72607324 11 + TSS region transcription start site region 102849
Tssr102850 11 72607363 to 72607435 72 + TSS region transcription start site region 102850
Tssr109098 11 72607757 to 72607805 48 - TSS region transcription start site region 109098
Tssr109099 11 72608448 to 72608475 27 - TSS region transcription start site region 109099
Gm24143 11 72616006 to 72616150 144 - snoRNA gene predicted gene, 24143
Gm25678 11 72648925 to 72648997 72 + miRNA gene predicted gene, 25678