Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:72216844-72318556

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930563E22Rik 11 72215138 to 72218450 3312 + unclassified non-coding RNA gene RIKEN cDNA 4930563E22 gene
D11Mit364 11 72232789 to 72232904 115 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 364
Slc13a5 11 72241990 to 72267056 25066 - protein coding gene solute carrier family 13 (sodium-dependent citrate transporter), member 5
Gm34252 11 72243645 to 72247660 4015 + lncRNA gene predicted gene, 34252
Cpgi3217 11 72266107 to 72267507 1400 CpG island CpG island 3217
Tssr102824 11 72266409 to 72266423 14 + TSS region transcription start site region 102824
Tssr102825 11 72266426 to 72266454 28 + TSS region transcription start site region 102825
Tssr102826 11 72266469 to 72266479 10 + TSS region transcription start site region 102826
Tssr109080 11 72266596 to 72266611 15 - TSS region transcription start site region 109080
Tssr109081 11 72266621 to 72266640 19 - TSS region transcription start site region 109081
1700051A21Rik 11 72266844 to 72268556 1712 + lncRNA gene RIKEN cDNA 1700051A21 gene
Tssr109082 11 72267141 to 72267164 23 - TSS region transcription start site region 109082
Tssr102827 11 72267240 to 72267247 7 + TSS region transcription start site region 102827
Tssr102828 11 72267251 to 72267267 16 + TSS region transcription start site region 102828
Tssr102829 11 72267268 to 72267273 5 + TSS region transcription start site region 102829
Tssr102830 11 72267274 to 72267300 26 + TSS region transcription start site region 102830
Tssr102831 11 72267302 to 72267320 18 + TSS region transcription start site region 102831
n-R5s70 11 72281016 to 72281131 115 + rRNA gene nuclear encoded rRNA 5S 70
4930511C11Rik 11 72281224 to 72281658 434 unclassified gene RIKEN cDNA 4930511C11 gene
Tssr102832 11 72301613 to 72301671 58 + TSS region transcription start site region 102832
Xaf1 11 72301629 to 72313733 12104 + protein coding gene XIAP associated factor 1
Tssr102833 11 72305459 to 72305474 15 + TSS region transcription start site region 102833
Tssr102834 11 72305501 to 72305517 16 + TSS region transcription start site region 102834
Tssr102835 11 72306560 to 72306575 15 + TSS region transcription start site region 102835
Tssr102836 11 72308608 to 72308629 21 + TSS region transcription start site region 102836
Cpgi3218 11 72314126 to 72314772 646 CpG island CpG island 3218
Tssr102837 11 72314438 to 72314455 17 + TSS region transcription start site region 102837
Fbxo39 11 72314444 to 72319416 4972 + protein coding gene F-box protein 39