Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:72180177-72250218

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4933427D14Rik 11 72154097 to 72207470 53373 - protein coding gene RIKEN cDNA 4933427D14 gene
Gm43951 11 72203952 to 72206840 2888 - protein coding gene predicted gene, 43951
Cpgi3215 11 72206300 to 72207901 1601 CpG island CpG island 3215
Tssr109073 11 72206996 to 72207011 15 - TSS region transcription start site region 109073
Tssr109074 11 72207213 to 72207279 66 - TSS region transcription start site region 109074
Tssr109075 11 72207413 to 72207488 75 - TSS region transcription start site region 109075
Tssr102820 11 72207521 to 72207532 11 + TSS region transcription start site region 102820
Tssr102821 11 72207537 to 72207620 83 + TSS region transcription start site region 102821
Txndc17 11 72207547 to 72210015 2468 + protein coding gene thioredoxin domain containing 17
Tssr102822 11 72208267 to 72208284 17 + TSS region transcription start site region 102822
Tssr102823 11 72208732 to 72208760 28 + TSS region transcription start site region 102823
Med31 11 72211724 to 72215592 3868 - protein coding gene mediator complex subunit 31
Cpgi3216 11 72214700 to 72215865 1165 CpG island CpG island 3216
Tssr109076 11 72214985 to 72215020 35 - TSS region transcription start site region 109076
Tssr109077 11 72215026 to 72215068 42 - TSS region transcription start site region 109077
Tssr109078 11 72215087 to 72215094 7 - TSS region transcription start site region 109078
4930563E22Rik 11 72215138 to 72218450 3312 + unclassified non-coding RNA gene RIKEN cDNA 4930563E22 gene
Tssr109079 11 72215177 to 72215218 41 - TSS region transcription start site region 109079
D11Mit364 11 72232789 to 72232904 115 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 364
Slc13a5 11 72241990 to 72267056 25066 - protein coding gene solute carrier family 13 (sodium-dependent citrate transporter), member 5
Gm34252 11 72243645 to 72247660 4015 + lncRNA gene predicted gene, 34252