Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:7181444-8591505

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cccd201 11 7183157 to 7188569 5412 - lncRNA gene coiled coil domain 201
Tssr100294 11 7197650 to 7197656 6 + TSS region transcription start site region 100294
Tssr100295 11 7197780 to 7197795 15 + TSS region transcription start site region 100295
Igfbp1 11 7197787 to 7202546 4759 + protein coding gene insulin-like growth factor binding protein 1
Tssr100296 11 7197804 to 7197811 7 + TSS region transcription start site region 100296
Tssr100297 11 7197832 to 7197839 7 + TSS region transcription start site region 100297
Tssr100298 11 7197852 to 7197854 2 + TSS region transcription start site region 100298
Cpgi2570 11 7197888 to 7198331 443 CpG island CpG island 2570
Tssr3421 11 7199820 to 7199828 8 + TSS region transcription start site region 3421
Tssr100299 11 7199853 to 7199856 3 + TSS region transcription start site region 100299
Tssr100300 11 7199884 to 7199894 10 + TSS region transcription start site region 100300
Tssr106771 11 7200821 to 7200829 8 - TSS region transcription start site region 106771
Tssr100301 11 7201972 to 7201983 11 + TSS region transcription start site region 100301
Igfbp3 11 7206086 to 7213923 7837 - protein coding gene insulin-like growth factor binding protein 3
Tssr106772 11 7207185 to 7207213 28 - TSS region transcription start site region 106772
Tssr100302 11 7207365 to 7207380 15 + TSS region transcription start site region 100302
Tssr106773 11 7208410 to 7208428 18 - TSS region transcription start site region 106773
Tssr106774 11 7209506 to 7209512 6 - TSS region transcription start site region 106774
Tssr100303 11 7210015 to 7210023 8 + TSS region transcription start site region 100303
Tssr106775 11 7210182 to 7210194 12 - TSS region transcription start site region 106775
Cpgi2571 11 7213044 to 7214512 1468 CpG island CpG island 2571
Tssr106776 11 7213414 to 7213421 7 - TSS region transcription start site region 106776
Tssr106777 11 7213440 to 7213454 14 - TSS region transcription start site region 106777
Tssr106778 11 7213535 to 7213615 80 - TSS region transcription start site region 106778
Tssr106779 11 7213816 to 7213823 7 - TSS region transcription start site region 106779
Tssr106780 11 7213850 to 7213859 9 - TSS region transcription start site region 106780
Tssr106781 11 7213915 to 7213929 14 - TSS region transcription start site region 106781
Tssr106782 11 7213943 to 7213990 47 - TSS region transcription start site region 106782
Tssr106783 11 7214169 to 7214179 10 - TSS region transcription start site region 106783
Gm36565 11 7217097 to 7262326 45229 + lncRNA gene predicted gene, 36565
Tssr106784 11 7232189 to 7232192 3 - TSS region transcription start site region 106784
Gm11986 11 7270351 to 7290374 20023 - lincRNA gene predicted gene 11986
Gm36653 11 7404694 to 7423332 18638 + lncRNA gene predicted gene, 36653
Gm36720 11 7428876 to 7432935 4059 + lncRNA gene predicted gene, 36720
n-TDgtc10 11 7869777 to 7869848 71 + tRNA gene nuclear encoded tRNA aspartic acid 10 (anticodon GTC)
Gm27393 11 7886444 to 7886505 61 - snRNA gene predicted gene, 27393
Tssr100304 11 7977078 to 7977083 5 + TSS region transcription start site region 100304
Gm11987 11 7994164 to 7995852 1688 - pseudogene predicted gene 11987
Gm24051 11 8004942 to 8005016 74 - snoRNA gene predicted gene, 24051
Gm11988 11 8112363 to 8114094 1731 - pseudogene predicted gene 11988
D11Dcr32 11 8117582 to 8117677 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 32
D11Dcr33 11 8240417 to 8240512 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 33
Cpgi2572 11 8345059 to 8345247 188 CpG island CpG island 2572
Gm11989 11 8383182 to 8383853 671 - pseudogene predicted gene 11989
D11Dcr34 11 8431175 to 8431272 97 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 34
Tns3 11 8431652 to 8664535 232883 - protein coding gene tensin 3
Tssr106785 11 8445095 to 8445102 7 - TSS region transcription start site region 106785
Tssr106786 11 8446133 to 8446154 21 - TSS region transcription start site region 106786
Tssr106787 11 8446233 to 8446236 3 - TSS region transcription start site region 106787
Tssr106788 11 8446286 to 8446291 5 - TSS region transcription start site region 106788
Tssr106789 11 8455269 to 8455291 22 - TSS region transcription start site region 106789
Tssr106790 11 8468450 to 8468459 9 - TSS region transcription start site region 106790
Tssr106791 11 8468467 to 8468477 10 - TSS region transcription start site region 106791
Tssr106792 11 8468488 to 8468511 23 - TSS region transcription start site region 106792
Cpgi2573 11 8468515 to 8469034 519 CpG island CpG island 2573
Tssr106793 11 8468516 to 8468545 29 - TSS region transcription start site region 106793
Tssr106794 11 8468555 to 8468560 5 - TSS region transcription start site region 106794
Tssr106795 11 8468571 to 8468580 9 - TSS region transcription start site region 106795
Tssr106796 11 8468648 to 8468706 58 - TSS region transcription start site region 106796
Tssr106797 11 8468707 to 8468757 50 - TSS region transcription start site region 106797
Tssr106798 11 8468817 to 8468822 5 - TSS region transcription start site region 106798
Tssr106799 11 8477141 to 8477152 11 - TSS region transcription start site region 106799
Tssr106800 11 8479925 to 8479931 6 - TSS region transcription start site region 106800
Tssr106801 11 8492406 to 8492411 5 - TSS region transcription start site region 106801
D11Dcr4 11 8495930 to 8496025 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 4
Tssr106802 11 8503783 to 8503794 11 - TSS region transcription start site region 106802
Tssr106803 11 8503796 to 8503803 7 - TSS region transcription start site region 106803
Tssr106804 11 8503886 to 8503910 24 - TSS region transcription start site region 106804
Tssr106805 11 8505035 to 8505045 10 - TSS region transcription start site region 106805
Tssr106806 11 8514464 to 8514467 3 - TSS region transcription start site region 106806
Tssr106807 11 8531733 to 8531767 34 - TSS region transcription start site region 106807
Tssr100305 11 8545340 to 8545342 2 + TSS region transcription start site region 100305
Tssr106808 11 8549219 to 8549244 25 - TSS region transcription start site region 106808
Tssr106809 11 8558399 to 8558410 11 - TSS region transcription start site region 106809
Tssr106810 11 8558974 to 8558985 11 - TSS region transcription start site region 106810
Tssr100306 11 8569849 to 8569858 9 + TSS region transcription start site region 100306
Tssr106811 11 8573446 to 8573452 6 - TSS region transcription start site region 106811
Tssr106812 11 8575315 to 8575363 48 - TSS region transcription start site region 106812
Tssr106813 11 8575589 to 8575592 3 - TSS region transcription start site region 106813
Tssr106814 11 8575613 to 8575633 20 - TSS region transcription start site region 106814
Tssr106815 11 8575655 to 8575666 11 - TSS region transcription start site region 106815
Tssr106816 11 8577232 to 8577247 15 - TSS region transcription start site region 106816
Tssr106817 11 8579179 to 8579184 5 - TSS region transcription start site region 106817
Tssr106818 11 8579204 to 8579212 8 - TSS region transcription start site region 106818
Tssr106819 11 8579245 to 8579267 22 - TSS region transcription start site region 106819
Tssr106820 11 8579405 to 8579430 25 - TSS region transcription start site region 106820
Tssr106821 11 8579462 to 8579504 42 - TSS region transcription start site region 106821
Tssr106822 11 8579702 to 8579720 18 - TSS region transcription start site region 106822
Tssr106823 11 8579811 to 8579820 9 - TSS region transcription start site region 106823
Tssr106824 11 8579850 to 8579858 8 - TSS region transcription start site region 106824
Tssr106825 11 8579959 to 8579965 6 - TSS region transcription start site region 106825
Tssr106826 11 8587258 to 8587306 48 - TSS region transcription start site region 106826
Tssr106827 11 8589438 to 8589441 3 - TSS region transcription start site region 106827
Tssr100307 11 8589807 to 8589822 15 + TSS region transcription start site region 100307