Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:71075306-71495321

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nlrp1a 11 71092236 to 71144704 52468 - protein coding gene NLR family, pyrin domain containing 1A
Del(11Nlrp1a-Nlrp1c-ps)1Smas 11 71092236 to 71285232 192996 chromosomal deletion deletion, Chr 11, Seth Masters
Tssr109057 11 71144750 to 71144794 44 - TSS region transcription start site region 109057
Tssr109058 11 71144800 to 71144813 13 - TSS region transcription start site region 109058
Nlrp1b 11 71153102 to 71230733 77631 - protein coding gene NLR family, pyrin domain containing 1B
D11Die40 11 71165763 to 71166136 373 DNA segment DNA segment, Chr 11, Dietrich 40
Tssr109059 11 71202851 to 71202885 34 - TSS region transcription start site region 109059
Gm23266 11 71233807 to 71233940 133 - snoRNA gene predicted gene, 23266
Nlrp1c-ps 11 71242430 to 71285232 42802 - pseudogene NLR family, pyrin domain containing 1C, pseudogene
Tssr109060 11 71285250 to 71285279 29 - TSS region transcription start site region 109060
Tssr109061 11 71285306 to 71285321 15 - TSS region transcription start site region 109061
Gm23311 11 71288425 to 71288558 133 - snoRNA gene predicted gene, 23311
Gm17874 11 71339781 to 71340359 578 - pseudogene predicted gene, 17874
D11Die38 11 71352258 to 71352446 188 DNA segment DNA segment, Chr 11, Dietrich 38
Gm33249 11 71385160 to 71392682 7522 + lncRNA gene predicted gene, 33249
D11Die37 11 71390047 to 71390178 131 DNA segment DNA segment, Chr 11, Dietrich 37
Gm16013 11 71429828 to 71436180 6352 - lincRNA gene predicted gene 16013
Cpgi3207 11 71429878 to 71430121 243 CpG island CpG island 3207
Cpgi3208 11 71439991 to 71440262 271 CpG island CpG island 3208