Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:71012236-71365232

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Derl2 11 71007440 to 71019841 12401 - protein coding gene Der1-like domain family, member 2
Tssr109052 11 71018498 to 71018521 23 - TSS region transcription start site region 109052
Cpgi3205 11 71018964 to 71020106 1142 CpG island CpG island 3205
Tssr109053 11 71019233 to 71019267 34 - TSS region transcription start site region 109053
Tssr109054 11 71019270 to 71019290 20 - TSS region transcription start site region 109054
Tssr102806 11 71019570 to 71019579 9 + TSS region transcription start site region 102806
Tssr102807 11 71019593 to 71019617 24 + TSS region transcription start site region 102807
Mis12 11 71019611 to 71027371 7760 + protein coding gene MIS12 kinetochore complex component
Tssr102808 11 71019626 to 71019638 12 + TSS region transcription start site region 102808
Tssr102809 11 71019641 to 71019653 12 + TSS region transcription start site region 102809
Tssr102810 11 71019868 to 71019888 20 + TSS region transcription start site region 102810
Tssr102811 11 71019895 to 71019938 43 + TSS region transcription start site region 102811
6330403K07Rik 11 71031941 to 71033513 1572 - lincRNA gene RIKEN cDNA 6330403K07 gene
Cpgi3206 11 71032867 to 71033482 615 CpG island CpG island 3206
Tssr109055 11 71032900 to 71032913 13 - TSS region transcription start site region 109055
Tssr109056 11 71033462 to 71033480 18 - TSS region transcription start site region 109056
D11Die35 11 71046306 to 71046421 115 DNA segment DNA segment, Chr 11, Dietrich 35
Gm12321 11 71057166 to 71057969 803 - pseudogene predicted gene 12321
Gm15377 11 71069423 to 71070134 711 + pseudogene predicted gene 15377
Del(11Nlrp1a-Nlrp1c-ps)1Smas 11 71092236 to 71285232 192996 chromosomal deletion deletion, Chr 11, Seth Masters
Nlrp1a 11 71092236 to 71144704 52468 - protein coding gene NLR family, pyrin domain containing 1A
Tssr109057 11 71144750 to 71144794 44 - TSS region transcription start site region 109057
Tssr109058 11 71144800 to 71144813 13 - TSS region transcription start site region 109058
Nlrp1b 11 71153102 to 71230733 77631 - protein coding gene NLR family, pyrin domain containing 1B
D11Die40 11 71165763 to 71166136 373 DNA segment DNA segment, Chr 11, Dietrich 40
Tssr109059 11 71202851 to 71202885 34 - TSS region transcription start site region 109059
Gm23266 11 71233807 to 71233940 133 - snoRNA gene predicted gene, 23266
Nlrp1c-ps 11 71242430 to 71285232 42802 - pseudogene NLR family, pyrin domain containing 1C, pseudogene
Tssr109060 11 71285250 to 71285279 29 - TSS region transcription start site region 109060
Tssr109061 11 71285306 to 71285321 15 - TSS region transcription start site region 109061
Gm23311 11 71288425 to 71288558 133 - snoRNA gene predicted gene, 23311
Gm17874 11 71339781 to 71340359 578 - pseudogene predicted gene, 17874
D11Die38 11 71352258 to 71352446 188 DNA segment DNA segment, Chr 11, Dietrich 38