Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:70804767-70964785

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scimp 11 70790932 to 70812561 21629 - protein coding gene SLP adaptor and CSK interacting membrane protein
Tssr109040 11 70812494 to 70812501 7 - TSS region transcription start site region 109040
Tssr109041 11 70812510 to 70812532 22 - TSS region transcription start site region 109041
Tssr109042 11 70812539 to 70812554 15 - TSS region transcription start site region 109042
Cpgi3201 11 70844276 to 70845734 1458 CpG island CpG island 3201
Tssr102795 11 70844745 to 70844816 71 + TSS region transcription start site region 102795
Rabep1 11 70844778 to 70943105 98327 + protein coding gene rabaptin, RAB GTPase binding effector protein 1
Tssr102796 11 70844927 to 70844959 32 + TSS region transcription start site region 102796
D11Die31 11 70857796 to 70857950 154 DNA segment DNA segment, Chr 11, Dietrich 31
Gm19967 11 70864660 to 70872754 8094 + sense intronic lncRNA gene predicted gene, 19967
Tssr102797 11 70869661 to 70869669 8 + TSS region transcription start site region 102797
Tssr102798 11 70877095 to 70877124 29 + TSS region transcription start site region 102798
Tssr102799 11 70879412 to 70879426 14 + TSS region transcription start site region 102799
Rpl23a-ps2 11 70879428 to 70879901 473 + pseudogene ribosomal protein L23A, pseudogene 2
Tssr102800 11 70884767 to 70884785 18 + TSS region transcription start site region 102800
Tssr102801 11 70884803 to 70884824 21 + TSS region transcription start site region 102801
Gm12322 11 70909257 to 70909645 388 - pseudogene predicted gene 12322
Tssr102802 11 70929793 to 70929805 12 + TSS region transcription start site region 102802
Nup88 11 70943058 to 70969973 26915 - protein coding gene nucleoporin 88
D11Die32 11 70953363 to 70953506 143 DNA segment DNA segment, Chr 11, Dietrich 32
D11Mit320 11 70953368 to 70953486 118 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 320
D11Die33 11 70954150 to 70954353 203 DNA segment DNA segment, Chr 11, Dietrich 33