Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:70657539-70967554

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eno3 11 70657202 to 70662513 5311 + protein coding gene enolase 3, beta muscle
Tssr3570 11 70657755 to 70657760 5 + TSS region transcription start site region 3570
Tssr102782 11 70657816 to 70657831 15 + TSS region transcription start site region 102782
Tssr102783 11 70657834 to 70657859 25 + TSS region transcription start site region 102783
Spag7 11 70663771 to 70669416 5645 - protein coding gene sperm associated antigen 7
Tssr102784 11 70665290 to 70665323 33 + TSS region transcription start site region 102784
Cpgi3195 11 70668550 to 70669977 1427 CpG island CpG island 3195
Tssr109018 11 70668652 to 70668677 25 - TSS region transcription start site region 109018
Tssr109019 11 70669283 to 70669304 21 - TSS region transcription start site region 109019
Camta2 11 70669463 to 70688105 18642 - protein coding gene calmodulin binding transcription activator 2
Tssr109020 11 70669961 to 70670002 41 - TSS region transcription start site region 109020
Tssr109021 11 70670004 to 70670023 19 - TSS region transcription start site region 109021
Tssr109022 11 70670039 to 70670079 40 - TSS region transcription start site region 109022
Tssr102785 11 70670250 to 70670260 10 + TSS region transcription start site region 102785
Cpgi3196 11 70670355 to 70670619 264 CpG island CpG island 3196
Tssr109023 11 70671598 to 70671608 10 - TSS region transcription start site region 109023
Tssr109024 11 70675587 to 70675591 4 - TSS region transcription start site region 109024
Tssr109025 11 70681649 to 70681673 24 - TSS region transcription start site region 109025
Tssr109026 11 70681766 to 70681774 8 - TSS region transcription start site region 109026
Tssr109027 11 70683322 to 70683397 75 - TSS region transcription start site region 109027
Tssr109028 11 70683618 to 70683640 22 - TSS region transcription start site region 109028
Tssr109029 11 70683649 to 70683673 24 - TSS region transcription start site region 109029
Tssr109030 11 70683690 to 70683701 11 - TSS region transcription start site region 109030
Tssr102786 11 70683828 to 70683854 26 + TSS region transcription start site region 102786
Tssr109031 11 70686135 to 70686153 18 - TSS region transcription start site region 109031
Tssr109032 11 70686899 to 70686958 59 - TSS region transcription start site region 109032
Tssr109033 11 70687214 to 70687250 36 - TSS region transcription start site region 109033
Cpgi3197 11 70687290 to 70688340 1050 CpG island CpG island 3197
Tssr109034 11 70687917 to 70687981 64 - TSS region transcription start site region 109034
Tssr109035 11 70688060 to 70688070 10 - TSS region transcription start site region 109035
Tssr109036 11 70688097 to 70688132 35 - TSS region transcription start site region 109036
Inca1 11 70688361 to 70700155 11794 - protein coding gene inhibitor of CDK, cyclin A1 interacting protein 1
Cpgi3198 11 70699812 to 70701183 1371 CpG island CpG island 3198
Tssr109037 11 70700105 to 70700170 65 - TSS region transcription start site region 109037
Tssr102787 11 70700210 to 70700300 90 + TSS region transcription start site region 102787
Tssr102788 11 70700473 to 70700552 79 + TSS region transcription start site region 102788
Kif1c 11 70700548 to 70731964 31416 + protein coding gene kinesin family member 1C
Tssr102789 11 70700606 to 70700615 9 + TSS region transcription start site region 102789
Tssr102790 11 70702285 to 70702296 11 + TSS region transcription start site region 102790
Tssr102791 11 70702363 to 70702376 13 + TSS region transcription start site region 102791
Mir6925 11 70705990 to 70706059 69 + miRNA gene microRNA 6925
Tssr102792 11 70715811 to 70715818 7 + TSS region transcription start site region 102792
Tssr102793 11 70718944 to 70718951 7 + TSS region transcription start site region 102793
D11Die30 11 70739125 to 70739260 135 DNA segment DNA segment, Chr 11, Dietrich 30
Gm12320 11 70748705 to 70755151 6446 - lincRNA gene predicted gene 12320
Tssr109038 11 70755156 to 70755173 17 - TSS region transcription start site region 109038
Gm12318 11 70762107 to 70762379 272 - pseudogene predicted gene 12318
Gm22760 11 70762140 to 70762232 92 - miRNA gene predicted gene, 22760
Cpgi3199 11 70763660 to 70764909 1249 CpG island CpG island 3199
Tssr102794 11 70764428 to 70764483 55 + TSS region transcription start site region 102794
Zfp3 11 70764447 to 70772928 8481 + protein coding gene zinc finger protein 3
Cpgi3200 11 70777256 to 70777453 197 CpG island CpG island 3200
Tssr109039 11 70789438 to 70789458 20 - TSS region transcription start site region 109039
Scimp 11 70790932 to 70812561 21629 - protein coding gene SLP adaptor and CSK interacting membrane protein
Tssr109040 11 70812494 to 70812501 7 - TSS region transcription start site region 109040
Tssr109041 11 70812510 to 70812532 22 - TSS region transcription start site region 109041
Tssr109042 11 70812539 to 70812554 15 - TSS region transcription start site region 109042
Cpgi3201 11 70844276 to 70845734 1458 CpG island CpG island 3201
Tssr102795 11 70844745 to 70844816 71 + TSS region transcription start site region 102795
Rabep1 11 70844778 to 70943105 98327 + protein coding gene rabaptin, RAB GTPase binding effector protein 1
Tssr102796 11 70844927 to 70844959 32 + TSS region transcription start site region 102796
D11Die31 11 70857796 to 70857950 154 DNA segment DNA segment, Chr 11, Dietrich 31
Gm19967 11 70864660 to 70872754 8094 + sense intronic lncRNA gene predicted gene, 19967
Tssr102797 11 70869661 to 70869669 8 + TSS region transcription start site region 102797
Tssr102798 11 70877095 to 70877124 29 + TSS region transcription start site region 102798
Tssr102799 11 70879412 to 70879426 14 + TSS region transcription start site region 102799
Rpl23a-ps2 11 70879428 to 70879901 473 + pseudogene ribosomal protein L23A, pseudogene 2
Tssr102800 11 70884767 to 70884785 18 + TSS region transcription start site region 102800
Tssr102801 11 70884803 to 70884824 21 + TSS region transcription start site region 102801
Gm12322 11 70909257 to 70909645 388 - pseudogene predicted gene 12322
Tssr102802 11 70929793 to 70929805 12 + TSS region transcription start site region 102802
Nup88 11 70943058 to 70969973 26915 - protein coding gene nucleoporin 88
D11Die32 11 70953363 to 70953506 143 DNA segment DNA segment, Chr 11, Dietrich 32
D11Mit320 11 70953368 to 70953486 118 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 320
D11Die33 11 70954150 to 70954353 203 DNA segment DNA segment, Chr 11, Dietrich 33