Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:70585545-70645559

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mink1 11 70562881 to 70614483 51602 + protein coding gene misshapen-like kinase 1 (zebrafish)
Tssr108979 11 70587157 to 70587160 3 - TSS region transcription start site region 108979
Tssr102747 11 70606656 to 70606670 14 + TSS region transcription start site region 102747
Tssr102748 11 70607101 to 70607113 12 + TSS region transcription start site region 102748
Gm12316 11 70611212 to 70613211 1999 - antisense lncRNA gene predicted gene 12316
Chrne 11 70614883 to 70619216 4333 - protein coding gene cholinergic receptor, nicotinic, epsilon polypeptide
Cpgi3191 11 70615120 to 70615901 781 CpG island CpG island 3191
Tssr108980 11 70615545 to 70615559 14 - TSS region transcription start site region 108980
Tssr108981 11 70615572 to 70615591 19 - TSS region transcription start site region 108981
Tssr108982 11 70615645 to 70615656 11 - TSS region transcription start site region 108982
Tssr108983 11 70615657 to 70615670 13 - TSS region transcription start site region 108983
Tssr108984 11 70615672 to 70615690 18 - TSS region transcription start site region 108984
Tssr108985 11 70615692 to 70615718 26 - TSS region transcription start site region 108985
Tssr102749 11 70615836 to 70615841 5 + TSS region transcription start site region 102749
4930544D05Rik 11 70615848 to 70616890 1042 + protein coding gene RIKEN cDNA 4930544D05 gene
Tssr102750 11 70615862 to 70615876 14 + TSS region transcription start site region 102750
Tssr102751 11 70615888 to 70615900 12 + TSS region transcription start site region 102751
Cpgi3192 11 70616339 to 70616699 360 CpG island CpG island 3192
Tssr108986 11 70619195 to 70619207 12 - TSS region transcription start site region 108986
D11Mit210 11 70619874 to 70620003 129 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 210
Gm12315 11 70623027 to 70625561 2534 - lincRNA gene predicted gene 12315
Tssr102752 11 70639118 to 70639175 57 + TSS region transcription start site region 102752
Gp1ba 11 70639122 to 70642036 2914 + protein coding gene glycoprotein 1b, alpha polypeptide
Tssr102753 11 70640219 to 70640246 27 + TSS region transcription start site region 102753
Tssr102754 11 70640361 to 70640372 11 + TSS region transcription start site region 102754
Slc25a11 11 70644196 to 70647479 3283 - protein coding gene solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11